Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu6g0002 ATGGCCTCTTCCCACGTTCTAGAAAAAGACCCCACCTCCAGATACGCGCGGTATGATGAGGTGCTGGGGAAAGGAGCCTTCAAGACTGTATACAAGGCGTTTGACGAAGTGGACGGAATCGAGGTTGCGTGGAACAGGATCAGCGCGGAGGACGTTGTGCAGACGCCGCAGCAGTTGGAGAAGCTGTATTCGGAGGTTCACTTGCTCAAGACCTTGAAGCACGACAATGTAATCAAGTTGTACAATTATTGGATCGATGATACCACCGCCACTGTCAACATGATCACCGAGTTGTTCACCTCCGGGAGTTTGAGGCAGTACCGGAAGAAGCATAAGAATGTGGATATGAAAGCCATCAAGAACTGGGCACGGCAGATTCTCCGTGGGTTGTGTTTTCTGCACAGTCAGACTCCTCCTATCATTCACAGGGACCTGAAATGTGACAATATTTTTGTCAATGGGAATAGTGGACTGGTTAAGATTGGAGATCTTGGATTGGCTATCGTTATGCAACAGCCTACTGCCCGTAGTGTCATCGGTACACCGGAGTTCATGGCCCCAGAGCTTTATGAGGAGGACTACAATGAACTTGTTGACATATATTCCTTTGGTATGTGCATCTTGGAAATGATCACCTGCGAGTACCCGTACAGTGAATGTAAAAATCCAGCTCAGATATATAAGAAAGTTACCTCTGGTATAAAGCCTGCTGCTCTTGCTAAAGTTAATGATCCTGAAGTGAAGCAATTCATAGAGAAATGTCTAGTTCCAGCATCACTGAGACTGTCGGCATGTGAACTACTGAAGGACCCATTCCTTGCAACTGAAAACGCAAAGGAGATCAATCATGATATACTGCAGCTGCCAAATAGTCCTCAAACCAAATTGGTGAACCCACCAATGTGCAAGCCTCATCCCATGGAGATAGATTCTAACTCCAGGCGTAGCTCACCTGGCTCGTCTGTGGGAAGAACTGATGAAACTTCTCAGGTTTCAACTTTTGATCTTGTGAGGATGACTGAGAATAACGAATTTAGGCTAAGAGGGGAGAAAAACGCTGAGAGCACAATTTCACTTACACTGCGAATTGCGGATGCACGTGGTGGAGCAAGGAATATCCATTTTCCATTCTACATCGATTCTGATACAGCAATTTCCATTGCTGAGGAGATGGTGGAACATCTGGAACTCACAAATGAGGATGTATCTGTCATTGCAGAGTTAATACAAGACATGATTGTTAAGCTTTCGCCCAACTGGAAGCCCTTGTGTGAGAACCTCTCGTCTGGGACAGATAATTTGTACAGGACTTCTTCAGAAGCTCAGAATGATGAACAGTTGAGCTGTCATTGGCCACTACAATCAAGTGATTACGACATGAAGACGATGTATGAGGATCTGGTTCGTCCAGGGCCTGTGGATGGAGGTTACCAGGAGAAACAAGAATCTGTTATGTCCGATATATCAGCAGAGTGTGGGATTACGATTGCCTCAGATTCTAAAGATGTGGAACCGGACATTTTTATTTTTGATGAATTCTGGGAGGGGTTCGATGTATTCAATTCCAATTCAGATGACAGGTTTAGTGGGCAAGAGGATGGACAAAAGAATCAATCAGAGAACTCAGCAGGCTCTCTGATCAATTCATGTTGCAGCCCATCCAAAAACTTCGATATGTCAAGCACAAGTTCTCTTAATCTAGTTGACAAAGACCCTTCAGACGAGCTGCAGTTGGAGCTTGAAGCAATAGAAACACAGTATCAACAATGCTTTCATGAGCTAGTGAAGATGAGGGAGGAAGCTATAGAGAATGCAAAAAGGAGATGGATAACAAGGAAGAAAATACCGGCTACTTGA 1857 0.448 MASSHVLEKDPTSRYARYDEVLGKGAFKTVYKAFDEVDGIEVAWNRISAEDVVQTPQQLEKLYSEVHLLKTLKHDNVIKLYNYWIDDTTATVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCFLHSQTPPIIHRDLKCDNIFVNGNSGLVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEDYNELVDIYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGIKPAALAKVNDPEVKQFIEKCLVPASLRLSACELLKDPFLATENAKEINHDILQLPNSPQTKLVNPPMCKPHPMEIDSNSRRSSPGSSVGRTDETSQVSTFDLVRMTENNEFRLRGEKNAESTISLTLRIADARGGARNIHFPFYIDSDTAISIAEEMVEHLELTNEDVSVIAELIQDMIVKLSPNWKPLCENLSSGTDNLYRTSSEAQNDEQLSCHWPLQSSDYDMKTMYEDLVRPGPVDGGYQEKQESVMSDISAECGITIASDSKDVEPDIFIFDEFWEGFDVFNSNSDDRFSGQEDGQKNQSENSAGSLINSCCSPSKNFDMSSTSSLNLVDKDPSDELQLELEAIETQYQQCFHELVKMREEAIENAKRRWITRKKIPAT* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu6g0002 618 MobiDBLite consensus disorder prediction 311 332 - -
Pvu6g0002 618 SUPERFAMILY Protein kinase-like (PK-like) 18 317 IPR011009 -
Pvu6g0002 618 MobiDBLite consensus disorder prediction 295 332 - -
Pvu6g0002 618 Coils Coil 573 600 - -
Pvu6g0002 618 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Pvu6g0002 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pvu6g0002 618 SMART serkin_6 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0002 618 MobiDBLite consensus disorder prediction 524 545 - -
Pvu6g0002 618 CDD STKc_WNK 14 273 - -
Pvu6g0002 618 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 357 413 IPR024678 GO:0004674|GO:0005524
Pvu6g0002 618 Pfam Protein kinase domain 19 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0002 618 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Pvu6g0002 618 PANTHER WNK KINASE 4 613 - -
Pvu6g0002 618 Gene3D - 355 450 - -
Pvu6g0002 618 ProSiteProfiles Protein kinase domain profile. 16 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu6g0002 618 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu6g0002 Pvu-Chr6 31963 35680 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu6g0002 1 614 MAP Kinase Kinase Kinase AT5G41990 51.954 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pvu6g0002 Pkinase 6.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu6g0002 K08867 - gmx:100783717 1030.01