Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1926 TTTTATGAGAGAACTCCTGAGCAGCAAGCATCATTGGGATACCTTGTTGATTCTGCACAGGCTGAAGGAACTCATGTTGATGCCCCGGGAGGCGGAGAAGCTGTGACTACTGATCAAGTGAGGAGAGAACCACATGGATCAGTAGGGGCAACAGCTGGCCATCGTGCCATTGCACAGAGTAACAGTGCAGAAATTGCTGAAGCCTTGTTTCGATATACTGCACCAGAAGAGGTGATGACTTTCCCTTCTACTTGTGGTGCCTGTGCTGCTAGTTGTGAGACTCGAATGTTTGTCACCAATATTCCTTACTTCCAAGAAGTAATTGTTATGGCATCCACATGTGATGCTTGTGGCTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAAGGAAAAATAATTACTCTTTCTGTGAAAAATGTCAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAAGTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACAACTGTTGAAGGTTTAATTACAAGAATTAGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGACAGTCTTGATGAAAATAGTAGAAGCAAGTGGATAGACTTTAAAGCAAGGCTAAACAAGCTTCTTAGCTTGGAAGAACCTTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTGAAAGAGGACAATCAATTAGCTTTTGAGGACTACGAGAGGTCATGGGAACAAAATGAAGAATTAGGTCTGAATGATATGGACACCTCTTCTGCCGAAGTTGGTGATGCACCAACCAATACTTCTAAAACTGAGTGA 879 0.4312 FYERTPEQQASLGYLVDSAQAEGTHVDAPGGGEAVTTDQVRREPHGSVGATAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACAASCETRMFVTNIPYFQEVIVMASTCDACGYRNSELKPGGRIPEKGKIITLSVKNVNDLSRDVIKSDTASVKVPEVDLELASGTLGGIVTTVEGLITRISESLERVHGFTFGDSLDENSRSKWIDFKARLNKLLSLEEPWTLILDDALANSFVAPATDDLKEDNQLAFEDYERSWEQNEELGLNDMDTSSAEVGDAPTNTSKTE* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1926 292 SMART zpr1 83 243 IPR004457 GO:0008270
Pvu5g1926 292 Gene3D ZPR1, zinc finger domain 73 128 IPR042452 -
Pvu5g1926 292 Gene3D ZPR1, A/B domain 129 271 IPR042451 -
Pvu5g1926 292 MobiDBLite consensus disorder prediction 23 49 - -
Pvu5g1926 292 PANTHER ZINC FINGER PROTEIN ZPR1 1 281 IPR040141 -
Pvu5g1926 292 MobiDBLite consensus disorder prediction 266 292 - -
Pvu5g1926 292 MobiDBLite consensus disorder prediction 269 292 - -
Pvu5g1926 292 Pfam ZPR1 zinc-finger domain 83 241 IPR004457 GO:0008270
Pvu5g1926 292 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 1 281 - -
Pvu5g1926 292 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 84 275 IPR004457 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1926 Pvu-Chr5 40768605 40772554 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1926 1 290 C2H2 Transcription Factor Family AT5G22480 70.990 2.58e-151 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1926 K06874 - gmx:100798741 526.168