Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1924 ATGGCGGAAGACGGTGGCGGATTTTCCGACCACCGCCACAACAAGGCGGTGGTGATGCGGTTTTCCCTTGGAGGTCGCTTTTGGCATCTCAGAAAGCTAACGAAAAACGGAAATATCGTAAAAGGCAGAGAAAAACACTGTGACAACGACCACGAAAGTAACAGCGGCAGCGCAACTGCTTATGAAGCTTTAGATGTTGGAGAACTAATAATTTACACAAGACAAGTAACCAGTAAAAGAAAGCAACCATCAAGTGGTTGTGGTATTGTCATTGGATCTTCTCATGCTTCTAAGAAAGGTCTAGCTGCAACTCCATCCCCAACAAGGAGGGGCAAAGGGAAGATTCAAATCGGGGTGGAAGGGATACTTATGAGAGCAACTGATGAACTTCAAGCCCTTCAAGAGGAACGCAAAAAAGTGGCTCCGGAGACAGCTGGAGCAATTGATCAGTTCTTGGTGAAACTGCGAGCCTGTGCAACAGGAGAATCATGCATCACATTTATTCTTGATGATCCTGTCGGAAACAGCTTTATTGAAAACCCAGAAGAGATTATAACAATAGAGGCTAA 569 0.4517 MAEDGGGFSDHRHNKAVVMRFSLGGRFWHLRKLTKNGNIVKGREKHCDNDHESNSGSATAYEALDVGELIIYTRQVTSKRKQPSSGCGIVIGSSHASKKGLAATPSPTRRGKGKIQIGVEGILMRATDELQALQEERKKVAPETAGAIDQFLVKLRACATGESCITFILDDPVGNSFIENPEEIITIEA 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1924 189 Gene3D ZPR1, A/B domain 99 188 IPR042451 -
Pvu5g1924 189 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 118 181 - -
Pvu5g1924 189 Pfam ZPR1 zinc-finger domain 112 179 IPR004457 GO:0008270
Pvu5g1924 189 SMART zpr1 53 180 IPR004457 GO:0008270
Pvu5g1924 189 PANTHER ZINC FINGER PROTEIN ZPR1 118 181 IPR040141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1924 Pvu-Chr5 40686930 40689216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1924 107 181 C2H2 Transcription Factor Family AT5G22480 69.333 1.31e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1924 K06874 - pvu:PHAVU_005G1861000 380.563