Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1923 GCTGAAGGAACTCATGTTGATGCCCCGGGAGGCGGAGAAGCTGTGACTACTGATCAAGTGAGGAGAGAACCACATGGATCAGTAGGGGCAACAGCTGGCCATCGTGCCATTGCACAGAGTAACAGTGCAGAAATTGCTGAAGCCTTGTTTCGATATACTGCACCAGAAGAGGTGATGACTTTCCCTTCTACTTGTGGTGCCTGTGCTGCTAGTT 214 0.5093 AEGTHVDAPGGGEAVTTDQVRREPHGSVGATAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACAAS 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1923 71 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 16 71 - -
Pvu5g1923 71 MobiDBLite consensus disorder prediction 1 35 - -
Pvu5g1923 71 PANTHER ZINC FINGER PROTEIN ZPR1 16 71 IPR040141 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1923 Pvu-Chr5 40686187 40686491 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1923 24 68 C2H2 Transcription Factor Family AT5G22480 80.000 9.33e-22 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1923 K06874 - pvu:PHAVU_005G1861002 146.362