Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1922 ATTCCTTACTTCCAAGAAGTAATTATTATGGCATCCACATGTGATGCTTGTGGCTACCGCAACTCTGAGTTGAAACCTGGTGGACGAATTCCTGAAAAAGGAAAAATAATTACTCTTTCTGTGAAAAATGTCAATGACCTGAGCCGTGATGTAATAAAGTCTGATACTGCAAGTGTAAAAGTTCCGGAAGTTGACTTGGAGCTGGCAAGCGGAACCCTTGGAGGAATAGTTACAACTGTTGAAGGTTTAATTACAAGAATTAGTGAAAGCCTTGAGAGGGTCCATGGCTTTACTTTTGGAGACAGTCTTGATGAAAATAGTAGAAGCAAGTGGATAGACTTTAAAGCAAGGCTAAACAAGGAGGATATGTTGTCCCGTTTTGTACCTCTTTCGACACCTCACTTTGAAAAATTTAGTAAAAAAGAAATGGACGACAAAGAGAATAGGGTTCACGGAATTTTAACCAAATGCATTGTAACAAGAAGGCTTCTTAGCTTGGAAGAACCTTGGACTCTAATTCTTGATGATGCATTAGCCAATTCTTTTGTAGCACCTGCAACTGATGATCTGAAAGAGGACAATCAATTAGCTTTTGAGGACTACGAGAGGTCATGGGAACAAAATGAAGAATTAGGTCTGAATGATATGGACACCTCTTCTGCCGAAGTTGGTGATGCACCAACCAATACTTCTAAAACTGAGTGA 705 0.3943 IPYFQEVIIMASTCDACGYRNSELKPGGRIPEKGKIITLSVKNVNDLSRDVIKSDTASVKVPEVDLELASGTLGGIVTTVEGLITRISESLERVHGFTFGDSLDENSRSKWIDFKARLNKEDMLSRFVPLSTPHFEKFSKKEMDDKENRVHGILTKCIVTRRLLSLEEPWTLILDDALANSFVAPATDDLKEDNQLAFEDYERSWEQNEELGLNDMDTSSAEVGDAPTNTSKTE* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1922 234 Gene3D ZPR1, zinc finger domain 1 28 IPR042452 -
Pvu5g1922 234 PANTHER ZINC FINGER PROTEIN ZPR1 162 223 IPR040141 -
Pvu5g1922 234 PANTHER ZINC FINGER PROTEIN ZPR1 1 120 IPR040141 -
Pvu5g1922 234 Gene3D ZPR1, A/B domain 29 213 IPR042451 -
Pvu5g1922 234 Pfam ZPR1 zinc-finger domain 1 120 IPR004457 GO:0008270
Pvu5g1922 234 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 162 223 - -
Pvu5g1922 234 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 1 120 - -
Pvu5g1922 234 SMART zpr1 1 185 IPR004457 GO:0008270
Pvu5g1922 234 MobiDBLite consensus disorder prediction 211 234 - -
Pvu5g1922 234 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 1 120 IPR004457 GO:0008270
Pvu5g1922 234 MobiDBLite consensus disorder prediction 209 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1922 Pvu-Chr5 40682803 40685496 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1922 1 232 C2H2 Transcription Factor Family AT5G22480 61.638 1.80e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1922 K06874 - pvu:PHAVU_002G0993000 361.303