Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1919 ATGGGGGCGCGCTCTGCTTCGGTGGTGCGCGCACCAATCATGATTGTGAAGTTGTGGTTAAGCTTGGGTAAGAGTAACGTAGTTGTATTGGTGTTGACATCAATATTAATATCATCATGCTGGTGCACAACAGCGAAAGCGATGTATTCTGATGCGGAGGCGCTGGTGAAGTTCAAGAAGTCGTTGACAAATACAAGGGCCCTGAAGAGTTGGGATTCAAACACAAACTCAAAGCCACCTTGCTCAGGCAATATTCCGAACTGGGTGGGCCTGTTTTGTTTGAGGGACAAGGTTTGGGGGTTGAGACTCGAGAACATGGGCCTAACAGGAAACATAGACATAATGACTCTGGCTTCAATCCCCGCTCTCCGCTCGGTTAGCCTAATGAACAACACCTTTGTGGGTCCCTTGCCTAGCGTCAGGATGCTGCCAAATCTTAAGGCCCTCTACCTCTCTTATAACCATTTCTCAGGACAGATTCCCGACGATGAATTTAAGGGTTTACTTAAATTGAGGAAACTCTATTTGGCCAATAATGAGTTCACAGGTCAAATTCCTTCCTCTCTTGCCACCTTGCCTACTCTAATCGTCCTCAGGCTCGACTCAAACAAGTTTCAAGGTCAAATCCCCCAGTTTCAACATCATAATAATAATAATACTTTGAAGATTATCAATTTTTCTAACAATGACTTGGAGGGTCCCATTCCGCGCAATCTAATCACCTTCGGCTCCTCCTCATTTACCGGGAACCCAGGACTATGCGGGGCGCCCCTGACGAATGAGTGCCAAGAGTTAGCCACACCATCCAAAATGCGTCTTCTAAAATCTTTACTAGCTTTCGTGGCGAGTGCACTGGTTCTAGCCATCCTGGTTTTAGTGTTGGTGATATGTCGGTTGAGGTCTCAAAGATCCCAACTGCAACACCACCAAGAACAATCTGCAACAGAAGGCCATAAGGCCTCGGCGTTGCAGGGCCAGGGCCTAGCCTCAAACAAACTCGTTCCTCCCATTTATGTGAAAACTAAAAGCCTAGCGGATCACTATGATGCTAGTCCTAGGCAGGTGTCATCAGGTCATGGTCATGGTCATGGAAATTCACATTCCAGGAGGGGGGAACAAGGCAAACTCACATTCCTGAGGCATCAAGATCCCAGGTTTGATTTGCAGGATTTGCTAAAGGCCTCCGCTGAAATTCTAGGAAGTGCAGGATTTGGGTCCTCCTATAAGGCCGTCATTTTAGACGGTTACGCCGTTGTTGTCAAGAGGTACAAGCAAATGAACAATGTGCCCAGAGAGGAGTTCCACGAGCACATGAGAAGACTAGGCAATCTCAGCCATCCCAATCTTCTCCCTCTCCTCGCCTATTATTACAGAAAGGAAGAAAAGCTTCTACTCTCTGCCTTTGTTCACAACGGTTGCTTGGCCACTCATCTTCATGGCAATCATAGCTCTCAAAAGCCAGGACTTGATTGGCCAACTCGCTTGAAAATCGTGAAAGGTGTAGCTAGGGGTTTGTCTTACCTATACAGTGCACTTCCAAGCGTAATTGTGCCTCATGGTCATCTCAAATCTTCCAACGTGCTTTTGGATAAATCCTTCGAACCCCAGCTCACTGATTATGCCCTCAGTCCCGTCATCAACATCGACCATGCCCAACAAATTATCATGCCTTACAAATCTCCTGAGTATGCTCAACTTGGGCGCATTACAAAGAAGACTGATGTGTGGAGTTTTGGAATTCTGATTCTTGAGATCTTGACCGGCAAATTCCCTGAAAACTATCTCACACTTAGACATAATACTAATTCTGACATAGCCAGTTGGGTAAATACCATGATTACTGAGAAGCGCACCAGTGACGTGTTTGACGTAGAGATGGGAGGAATCGGAAATTGTAAAGCTGAATTACTCAAACTCTTGAAGATTGGCTTGAGTTGTTGTGAGGAGAATGTGGAAAGAAGGCTTGATATCAAGGAAGCTCTTGAGCAAATTGAAGACTTGAAAGAGAGTGAAAACGATGATATTATTGGAGAATACTCCTCCTCTCCCATCACCCCAGAAAGAAATGCTTATAGAGCGGTGTGA 2085 0.458 MGARSASVVRAPIMIVKLWLSLGKSNVVVLVLTSILISSCWCTTAKAMYSDAEALVKFKKSLTNTRALKSWDSNTNSKPPCSGNIPNWVGLFCLRDKVWGLRLENMGLTGNIDIMTLASIPALRSVSLMNNTFVGPLPSVRMLPNLKALYLSYNHFSGQIPDDEFKGLLKLRKLYLANNEFTGQIPSSLATLPTLIVLRLDSNKFQGQIPQFQHHNNNNTLKIINFSNNDLEGPIPRNLITFGSSSFTGNPGLCGAPLTNECQELATPSKMRLLKSLLAFVASALVLAILVLVLVICRLRSQRSQLQHHQEQSATEGHKASALQGQGLASNKLVPPIYVKTKSLADHYDASPRQVSSGHGHGHGNSHSRRGEQGKLTFLRHQDPRFDLQDLLKASAEILGSAGFGSSYKAVILDGYAVVVKRYKQMNNVPREEFHEHMRRLGNLSHPNLLPLLAYYYRKEEKLLLSAFVHNGCLATHLHGNHSSQKPGLDWPTRLKIVKGVARGLSYLYSALPSVIVPHGHLKSSNVLLDKSFEPQLTDYALSPVINIDHAQQIIMPYKSPEYAQLGRITKKTDVWSFGILILEILTGKFPENYLTLRHNTNSDIASWVNTMITEKRTSDVFDVEMGGIGNCKAELLKLLKIGLSCCEENVERRLDIKEALEQIEDLKESENDDIIGEYSSSPITPERNAYRAV* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1919 694 ProSiteProfiles Protein kinase domain profile. 393 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1919 694 Gene3D Phosphorylase Kinase; domain 1 361 468 - -
Pvu5g1919 694 Gene3D Transferase(Phosphotransferase) domain 1 469 682 - -
Pvu5g1919 694 Pfam Protein tyrosine and serine/threonine kinase 397 662 IPR001245 GO:0004672|GO:0006468
Pvu5g1919 694 SUPERFAMILY Protein kinase-like (PK-like) 397 668 IPR011009 -
Pvu5g1919 694 Gene3D Ribonuclease Inhibitor 217 262 IPR032675 -
Pvu5g1919 694 Gene3D Ribonuclease Inhibitor 48 216 IPR032675 -
Pvu5g1919 694 MobiDBLite consensus disorder prediction 350 371 - -
Pvu5g1919 694 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 676 - -
Pvu5g1919 694 Pfam Leucine rich repeat N-terminal domain 50 93 IPR013210 -
Pvu5g1919 694 Pfam Leucine rich repeat 144 205 IPR001611 GO:0005515
Pvu5g1919 694 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 24 676 - -
Pvu5g1919 694 Coils Coil 650 670 - -
Pvu5g1919 694 SUPERFAMILY L domain-like 39 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1919 Pvu-Chr5 40582566 40585407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1919 26 674 Receptor kinase-like Gene Family AT5G35390 48.260 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu5g1919 PK_Tyr_Ser-Thr 1.2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1919 - - pvu:PHAVU_005G185800g 1333.93