Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1918 ATGGTTATAGAAAAGGATGAGAAGGCAGATGAAGGAAGAGAAATGTGGCACTCAAATTCGAAGGGATCAGGGATTAGAAGAGGAGGAGGCGGCAATGGAATAGTGGCCGTGGCTATAGACAACGATAAAGGAAGCTCGTGCGCTCTTAAATGGGCCGTTGATTCTCTGCTAGCCAGAGGTCAAACAGTTATTCTCCTCCACGTTTTGCACGGGACATCTGTTTCCAGGGGTAGCGAGGCCATTATTTGTAACATCACCAATTCATCCGTATCTCCTCATAGATACCAACATGATACCTCTATGAAGGATTTGTTTCTCCCTTTCCACTGCTATTGTACACGCAAAGATATACAATGCCTTGATGTCCTTCTTCAAGACCATGATGATGTGAAAGCAATAACAGAATATGTCTCTTATGCTGCAATTGAAAACTTGGTGATTGGTGCAACATCCAGGCGTGGGTTTATTCGATTTAAGTCATCGTCAAGTAGCATATTAAAGGGGGCGCCGGACTTTTGTACCGTGTTTATCGTTTCTAAGGGAAAAATCTCGTCAGTTCGGAATGCTACTCGTCCAGCCGCACATACATCCCCACTTCTGAGCCACATACGTAATCTAAAGAACAAGGAGGAACATCATCCTGAAATACCCTTCAGAAATGCGAATACGAGAGACGGGACGTCAATCAAACCTCAGGGCTGGCTCGATGAATCTTTTAAGTCTCCATTTCCAAGAAGAGGCACGACTGGAATATCATGCGTGGACTTCCCAGACTCAGATACAGAAATATCTTTTGTAAGCTCTAATAGGCCAAGCACTGGTCGTTCATCCTCCGTTTATGACTGTATTGAGGCAGGCCGAACTTCGCATGTTTCTAACAGTTCAGATCATAATTTTGGATCAGCCCGATTGGGACTCAGGTTCAATGACCCCAGTTCACCCCATACTTCTGTCTCTCATGAAAGCAGTAGAACATCATTCTCTTATTCATCACAGAGCATGGATGAAGAAGCAGAAGCTGATGTCAGGAGGCTGAAGCTTGAGGTAAAGCAATCGATGGAGATGTACAATGCAGCATGCAGAGAAGCACTAACAGCCCAGCAGAAGTTAATGGAGTTGAAAGACTGGAGAATGGAGGAAAAACACAAATTAGAAGAGGCACATTTGGCTCAGGAAGCTGCGCTGGCAATTGCAGAGCAAGAGAAAGCGAGACGTAGAGCAGCCATGGAAACTGCTGAAGCATCGAAGAAAATTGCTGAGATTGAAACACACAGAAGAGCGAGTGTTGAAGTTAAAGCTCTTAAAGAAGCAGAGAAGATGAGGAAGCTTTTGGACAATCTAACCCAAACTGATGTAAGATATAGAAGATACAGTATAGAGCAGATTGAAGCAGCTACGAACTTCTTTGCTGAATCCCAGAAAATCGGGGAAGGAGGTTATGGCCCTGTTTTTAAATGTTTCCTTGATCACACTCCAGTCGCTGTCAAGGTTCTACGTCCAGATGCTGCTCAAGGGAAGTCACAGTTTCAGCAAGAGATTGACATTCTGAGCTGCATAAGACACCCAAACATGGTACTTCTTCTAGGAGCGTGTCCGGAGTATGGCGTACTGATTTATGAATATATGGCTAATGGAAGCCTAGAAGATTGTCTGTTTCGAAAAAGGAATAACAGTGTTCTGTCTTGGCAGCTGAGGTTCCGAATTGCTGCTGAGATAGCGACGGGCCTACTATTCCTGCATCAGACCAAGCCTGAACCTTTTGTACACCGTGATCTGAAACCAGGCAACATTTTGCTAGACCAGAATTATGTGAGTAAGATAAGCGATGTTGGATTGGCAAGGCTTGTCCCACAAGTAGCCGAAAACGTAACACAATGCTGCATGACATCAGCAGCTGGAACATTTTGTTATATTGATCCTGAGTATCAGCAAACAGGAATGCTTGGCGTGAAGTCGGATGTTTACTCTCTTGGAATAATTTTTCTTCAACTATTGACAGGCAGAACTCCAATGGGATTAGCTTACCGTGCTGGAGAGGCTATAGAGAATGACACCTTTGAGGAAATGCTGGACCCATCCGTAACCGATTGGCCTCTTCAACAAGTCCTGTGCCTTGCAAAAATGGCAGTCAAGTGTGCGGAACTCAGGCGAAAAGACAGGCCAGACCTTGCCAAAGTGGTGTTGCCAGAGCTTGATAAATTGAGAGACTTTGCCGAAGAAAACATGACAGTGCAGTCGTTGCCCATCATTTTAGGATGCATTGCGCCTTCACCCTGCCACACTGAAACTTCTGTGCAACAGGATGTGATGAGCGACCCGCGCTTTGTACATTCCGTAGGCTCATCAGCTCCATCAACGCCCACAGAAGGAAATCCTTAA 2379 0.4506 MVIEKDEKADEGREMWHSNSKGSGIRRGGGGNGIVAVAIDNDKGSSCALKWAVDSLLARGQTVILLHVLHGTSVSRGSEAIICNITNSSVSPHRYQHDTSMKDLFLPFHCYCTRKDIQCLDVLLQDHDDVKAITEYVSYAAIENLVIGATSRRGFIRFKSSSSSILKGAPDFCTVFIVSKGKISSVRNATRPAAHTSPLLSHIRNLKNKEEHHPEIPFRNANTRDGTSIKPQGWLDESFKSPFPRRGTTGISCVDFPDSDTEISFVSSNRPSTGRSSSVYDCIEAGRTSHVSNSSDHNFGSARLGLRFNDPSSPHTSVSHESSRTSFSYSSQSMDEEAEADVRRLKLEVKQSMEMYNAACREALTAQQKLMELKDWRMEEKHKLEEAHLAQEAALAIAEQEKARRRAAMETAEASKKIAEIETHRRASVEVKALKEAEKMRKLLDNLTQTDVRYRRYSIEQIEAATNFFAESQKIGEGGYGPVFKCFLDHTPVAVKVLRPDAAQGKSQFQQEIDILSCIRHPNMVLLLGACPEYGVLIYEYMANGSLEDCLFRKRNNSVLSWQLRFRIAAEIATGLLFLHQTKPEPFVHRDLKPGNILLDQNYVSKISDVGLARLVPQVAENVTQCCMTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIIFLQLLTGRTPMGLAYRAGEAIENDTFEEMLDPSVTDWPLQQVLCLAKMAVKCAELRRKDRPDLAKVVLPELDKLRDFAEENMTVQSLPIILGCIAPSPCHTETSVQQDVMSDPRFVHSVGSSAPSTPTEGNP* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1918 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Pvu5g1918 792 MobiDBLite consensus disorder prediction 1 17 - -
Pvu5g1918 792 MobiDBLite consensus disorder prediction 1 25 - -
Pvu5g1918 792 Gene3D Transferase(Phosphotransferase) domain 1 542 747 - -
Pvu5g1918 792 Pfam Universal stress protein family 34 170 IPR006016 -
Pvu5g1918 792 Coils Coil 381 401 - -
Pvu5g1918 792 MobiDBLite consensus disorder prediction 310 335 - -
Pvu5g1918 792 CDD STK_N 35 181 - -
Pvu5g1918 792 PANTHER OS02G0152300 PROTEIN 31 774 - -
Pvu5g1918 792 MobiDBLite consensus disorder prediction 305 335 - -
Pvu5g1918 792 SMART serkin_6 469 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1918 792 ProSiteProfiles Protein kinase domain profile. 469 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1918 792 PANTHER BNAA05G18880D PROTEIN 31 774 - -
Pvu5g1918 792 Pfam Protein kinase domain 470 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1918 792 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 35 178 - -
Pvu5g1918 792 MobiDBLite consensus disorder prediction 211 230 - -
Pvu5g1918 792 Gene3D HUPs 34 178 IPR014729 -
Pvu5g1918 792 SUPERFAMILY Protein kinase-like (PK-like) 451 727 IPR011009 -
Pvu5g1918 792 Gene3D Phosphorylase Kinase; domain 1 424 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1918 Pvu-Chr5 40575049 40579143 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1918 15 742 Receptor kinase-like Gene Family AT1G78940 55.851 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pvu5g1918 Pkinase 1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1918 - - gmx:100801601 1164.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1918 5 40575049 40579143 Pvu10g1712 10 43170471 43174245 PCT