Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1917 ATGTTGGTTAAAATGCAAACAAATTGGTTTGTCCCTGTTGCAGTCCCATTCCCAGTGCCACACAAGCTTGAGGGTTGTTTTGTGATGAGTAAGTGCGTGCTATCCACGCATCCTCCCACGCCATTTGAAGTGGGTAATGATAAACCGAGAAGAAGAAGATCAAATTGGCGTTGTGGTTGTGGTTCGGAGGAGGAGGCACAGGCACAGAGACAGGGTCTCTCTGAATCTGAATCTGAATCTGAATCCAAACGGGAATGGGAAGTGCAGGAAGCTCGCAGGGCGATTTCAAGTTATCTGGGAGAATTGGGAGTGACAGAGGAGGAATCGTTGTCCATCGCGTGGAATTGCCCGGGGTATGTGAAGATGTTGATGGAAGGTGTGAGGGATTTGGATGAGTGGGGGTGGGAGGCAGATAAAGAATTTGCAGGGTTGAGCTTCAAGGACAAGATTCTTCGTGTTGCCGCTCAAAAGGGAGACAAGGGGAAAATTGCCTACTTAGAGACTCTTGGTCTCACTATCTCTTGGTCTATCAACGTCGCCGGATATCTCTCCGCTCACACCCTCCCCTCTCTCATACACAAGGTTACACGCATCAAACAACTCTTCTTTTCTCCCGTTGATAACGATAACGATCACTACCCTTCGTTGCTCATTAGAAACATTCGCCTCACGATGCGCCACTTGTCTATTTCAATTGACGAAGACTTGCAACGCACTTTCTCCTTTTTCGAAAAGCTTCAAGCAAAGCCTGGTGGCCTAAACATCTTAGCTTCCCCAGATTCCGCTTTCTGTTTCTTAATCCAATCCTTCCCTCGTCTCCTTCACTTATCCGTAGACAACCACTTAACACACATACTTGATTCTCTCCACAATTTTGGAATTCCCACATCTCGCATCTCAAACATAGTACTGGCTTTTCCTCCTCTTCTCTTCTGGAATCTTCAACTCCTTCAAGCTAGACTCCTCACCTTCAAGCAGATTAACGTGGCTGATCAAGATTATGCCAAGTTGCTGCTAAAATATCCTTGGCTTCTGTCGACAAGTTTTCAAGAAAATTATGCGGAGCTCCTTTCTTTTTCGTATTCTATCAAGGTTCCAAAGACACAGATAGACCGTGCAATTGAAAGCCACCCTCATCTATTAAGCTGTTCAACTAGCAAGCTGGAGTTGATGGTAGATCAGTTTGCTAAACTTGGAGTTCGGAATAAAAAGTTAAATCAGGTTATTGCTAGAAGTCCTCAACTACTACTACGGAAGCCCAAAGACTTTCTACAGATTGTTACGTTGTTTCAAAATATGGATTTAGATAAAGAAACTATTGGAAGAATACTTGCCCGCTGCCCTGAAATTTTTGCTTCCAGCATTAAAAGAACTTTAGAAAGGAAGATTGAATTCCTTTGTAGGGTTGGCGTTCGTAAGACTTTCCTTCCTGGGGTTATCAGAAAGTATCCTGAATTACTTGTTTCTGACATTGACAAAACTTTACTGCAAAGGATAATGTACTTGATGAAGTCAGGTCTTTCAGAGGAAGACATTGCATTTATGGTACGTACATTTTCTCCTCTTCTTGGGTACAGTATAGAGGGGGTTCTTAAGCCAAAAATAGAATTCCTTGTGAACTCAATGGAGAGGCCAGTAAGAGATGTGGTGAGTTACCCTCGGTATTTTAGCTATTCACTAGAGAAGAAGATAAAGCCAAGATATTGGGTGTTGAAAAGAAGGGACATCAAATGTAGCTTAAAGGAGATGCTGGGAAAAAATGATGAAGAATTTGCTGCTGAATTTATGGGTATTGGAAGGATGCCCGTCTCTCCTCCCGTGTAA 1824 0.4326 MLVKMQTNWFVPVAVPFPVPHKLEGCFVMSKCVLSTHPPTPFEVGNDKPRRRRSNWRCGCGSEEEAQAQRQGLSESESESESKREWEVQEARRAISSYLGELGVTEEESLSIAWNCPGYVKMLMEGVRDLDEWGWEADKEFAGLSFKDKILRVAAQKGDKGKIAYLETLGLTISWSINVAGYLSAHTLPSLIHKVTRIKQLFFSPVDNDNDHYPSLLIRNIRLTMRHLSISIDEDLQRTFSFFEKLQAKPGGLNILASPDSAFCFLIQSFPRLLHLSVDNHLTHILDSLHNFGIPTSRISNIVLAFPPLLFWNLQLLQARLLTFKQINVADQDYAKLLLKYPWLLSTSFQENYAELLSFSYSIKVPKTQIDRAIESHPHLLSCSTSKLELMVDQFAKLGVRNKKLNQVIARSPQLLLRKPKDFLQIVTLFQNMDLDKETIGRILARCPEIFASSIKRTLERKIEFLCRVGVRKTFLPGVIRKYPELLVSDIDKTLLQRIMYLMKSGLSEEDIAFMVRTFSPLLGYSIEGVLKPKIEFLVNSMERPVRDVVSYPRYFSYSLEKKIKPRYWVLKRRDIKCSLKEMLGKNDEEFAAEFMGIGRMPVSPPV* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1917 607 PANTHER CGI-12 PROTEIN-RELATED 139 605 IPR003690 GO:0003690|GO:0006355
Pvu5g1917 607 Pfam mTERF 286 592 IPR003690 GO:0003690|GO:0006355
Pvu5g1917 607 Gene3D Transcription termination factor 3, mitochondrial 385 599 IPR038538 -
Pvu5g1917 607 PANTHER TRANSCRIPTION TERMINATION FACTOR 4, MITOCHONDRIAL 139 605 - -
Pvu5g1917 607 SMART mt_12 546 577 IPR003690 GO:0003690|GO:0006355
Pvu5g1917 607 SMART mt_12 513 545 IPR003690 GO:0003690|GO:0006355
Pvu5g1917 607 SMART mt_12 441 472 IPR003690 GO:0003690|GO:0006355
Pvu5g1917 607 SMART mt_12 371 401 IPR003690 GO:0003690|GO:0006355
Pvu5g1917 607 SMART mt_12 477 508 IPR003690 GO:0003690|GO:0006355
Pvu5g1917 607 SMART mt_12 406 436 IPR003690 GO:0003690|GO:0006355
Pvu5g1917 607 SMART mt_12 335 366 IPR003690 GO:0003690|GO:0006355
Pvu5g1917 607 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pvu5g1917 mTERF 1.3e-90 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1917 K15032 - gmx:100802127 870.152