Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1907 ATGGGTCCGGCGGAGGAGAAGATAGAGCGCGATCCTTTCGACAACCTCGAGGATCCCGACCACACTGCCTTCGCCTCCTCCCCATCCGCCTCCAAAGTCCGTCCCTTCAATTTCGAGCCCACCGTTGTTGATTTCCGGAGCTCCTCCGCCTTCAACATTAGACGCATGAGCAGGAGTATATACTTTGTCTTAATCAAGGCCAAGATCAACATCTTGCTTCCCTTTGGTCCATTCGCCATTTTACTTCATTATCTCACCGGACACCATGGATGGGTCTTCTTCTTCACCTTATTGGGTATTGCTCCTTTGGCCGAACGTCTCGGTTATGCCACCGAGCAGCTTGCGTTCTTCACGGGACCAACAGTTGGGGGTCTGCTTAATGCCACATTTGGGAATGCAACTGAAATGATTATATCAATTTACGCATTGAAAAGCAATATGATAAGAGTTGTTCAGCAATCTTTGCTTGGTTCTATCCTGTCAAATATGCTTCTAGTTCTTGGCTGTGCTTTCTTTACCGGTGGCATTGCCCATTACCAAAAAGTACAGGTTTTTGATAAGGCTGCTGCCGTTGTCAATTCTGGGTTACTCTTGATGGCTGTAATGGGAATCCTGTTTCCTGCTGTGCTTTACTTTACTCACTCAGAAGTTCATGAAGGGAAGTCAGTGTTGTCTCTATCAAGATTTAGCAGCTGCATAATGCTGGTGGCGTATGCAAGCTACCTTTTCTTTCAACTTGGAAGTCGGCAAAATGTTTATAGTCCAGTTAATGAGGAAGGAGATAGTGGTGAAAATTCTGATGAGGAAGAAGAGCTTGAATTAAGTCAGTGGGAGGCAATAGCCTGGCTTGCTATTTTGACAGCATGGGTATCTATATTGTCTGGATACCTTGTAGATGCCCTACAGGGTGCATCTGAGTCATTAAATATGTCAGTGGCTTTTATTTCTGTCATCTTGCTTCCAATTGTAGGCAACGCGGCAGAACATGCCAGTGCCATAATGTTTGCCGTAAAGGACAAGCTTGATATTACTATTGGAGTTGCCATTGGATCGTCTACACAGATATCTATGTTTGTGATTCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACGCTTTTTATCACCGTGTTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGCTTGATGCTTGTGCTGTGTTATCTGATAGTTGCCGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGGTGATGACTAA 1299 0.4434 MGPAEEKIERDPFDNLEDPDHTAFASSPSASKVRPFNFEPTVVDFRSSSAFNIRRMSRSIYFVLIKAKINILLPFGPFAILLHYLTGHHGWVFFFTLLGIAPLAERLGYATEQLAFFTGPTVGGLLNATFGNATEMIISIYALKSNMIRVVQQSLLGSILSNMLLVLGCAFFTGGIAHYQKVQVFDKAAAVVNSGLLLMAVMGILFPAVLYFTHSEVHEGKSVLSLSRFSSCIMLVAYASYLFFQLGSRQNVYSPVNEEGDSGENSDEEEELELSQWEAIAWLAILTAWVSILSGYLVDALQGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAIGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLVLCYLIVAASFFVHVDPKSGDD* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1907 432 TIGRFAM caca2: calcium/proton exchanger 63 422 - -
Pvu5g1907 432 Pfam Sodium/calcium exchanger protein 280 419 IPR004837 GO:0016021|GO:0055085
Pvu5g1907 432 Pfam Sodium/calcium exchanger protein 91 246 IPR004837 GO:0016021|GO:0055085
Pvu5g1907 432 Gene3D - 120 256 IPR044880 -
Pvu5g1907 432 Gene3D - 267 423 IPR044880 -
Pvu5g1907 432 TIGRFAM cax: calcium/proton exchanger 72 422 IPR004798 GO:0006816|GO:0015369
Pvu5g1907 432 MobiDBLite consensus disorder prediction 1 18 - -
Pvu5g1907 432 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 16 429 IPR004713 GO:0006812|GO:0008324|GO:0016021
Pvu5g1907 432 MobiDBLite consensus disorder prediction 1 29 - -
Pvu5g1907 432 PANTHER VACUOLAR CATION/PROTON EXCHANGER 16 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1907 Pvu-Chr5 40482698 40492173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1907 58 427 Antiporters AT3G13320 74.933 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1907 K07300 - gmx:100806000 713.761