Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1905 ATGGAGTGTAGAGAAGTCAACGTGGTTTCTACCGAACCGGTTATATATATATACATAGACACTGAAAGGAAGAAAATGGTAGGAGCATTGCGTGGTTTGACGATGGAGTCAGCAAAAAGTGCAGTGTTGGTGATATTTTGTTCAGTTTGGTTGTGGCGGGTGCAGGGTGGCAGTGGCAGTGTTATCGTATCGAAGGACGGAAATGGAGATTATAGAACGGTGGGAGAAGCCATCTTGAAGGCTCCGGAGATGAGTGAGAAACCTTATACCATTCACGTTCGAGCAGGCACTTATCAAGAATACCTCTTCATTCCTCCTCATAAGACTAATATTAGACTCCTTGGAGATGGACCTCACCTCACCAAAATAGTAGCCTACCAAAAAGGTTCCACCTTAGACATTCGTGGAGATGGGTTCATGGCAGTGAAGATGGGGTTTGCGAACTGGGCGGGGCTAAACGCAAGCGGTGCAGTGGCGATTCGGAACGAGGCAGACAAGAGCATATTCTACCAATGCTCCATAGAAGGACTCCAGGACACACTGTGGGCGGTTTCCGGTCGTCAGTTCTACAAAAGGTGCGCCATCTACGGCACAGTCGACTTCATCTACGGCAACGCAGCGGCGGCGTTCCAGGACTGCATGTTATACGCGCGGTACAGAGAGTACGTCACGTTCACGGCTCAGTCGCGAGAGGATCCGAATGAGAAGACTGGGTTCAGCTTCCAAAGATGCGAATTCAGAATGTCCCCGCAGGATGAGAGCAGAAAGAGAGAGGTGCATGCGAGCCTGGGCCGTCCCCTCAGAGCCTACTCCACCGTCGCCATCCTCCACTCCTACATTGACTCCGTCGTGGATCCTGAAGGTTGGGAGCCCATGCCCCACCAGCCCACTAACAAAGTCACCTACATCGAGTTCCACAATACTGGGCCGGGCTCTAACACCGATGGCAGAGTTAAATGGGCTGGCGGTCACCCGGCCCAAGCAGCCCGCTTCACTGCCTCCTCTCTCTTAGACGCTGACTCTTGGATTCCCTCCACCGGAGTTCCCTACCACACTGGACTCTAG 1065 0.5239 MECREVNVVSTEPVIYIYIDTERKKMVGALRGLTMESAKSAVLVIFCSVWLWRVQGGSGSVIVSKDGNGDYRTVGEAILKAPEMSEKPYTIHVRAGTYQEYLFIPPHKTNIRLLGDGPHLTKIVAYQKGSTLDIRGDGFMAVKMGFANWAGLNASGAVAIRNEADKSIFYQCSIEGLQDTLWAVSGRQFYKRCAIYGTVDFIYGNAAAAFQDCMLYARYREYVTFTAQSREDPNEKTGFSFQRCEFRMSPQDESRKREVHASLGRPLRAYSTVAILHSYIDSVVDPEGWEPMPHQPTNKVTYIEFHNTGPGSNTDGRVKWAGGHPAQAARFTASSLLDADSWIPSTGVPYHTGL* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1905 354 PANTHER PECTINESTERASE 40 353 - -
Pvu5g1905 354 SUPERFAMILY Pectin lyase-like 59 353 IPR011050 -
Pvu5g1905 354 PANTHER PECTINESTERASE 40 353 - -
Pvu5g1905 354 Pfam Pectinesterase 61 339 IPR000070 GO:0030599|GO:0042545
Pvu5g1905 354 Gene3D - 59 354 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1905 Pvu-Chr5 40476952 40478321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1905 62 354 Carbohydrate Esterase AT3G59010 42.122 4.40e-73 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1905 K01051 - gmx:102665195 477.248