Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1897 ATGGACCCTCTCTCTCTCCTCCAAGTTCTTCAGTCACACTCCTTTGCAACTGTGCTTGCTGTGGGTGCTTCATCTCTTCTGTTCCTCATCCTCAAACTCCGACTCACTGGCAGACATGCAAGACTTCCTTCAGTACCAGCTGTTCCTGGACTTCCCGTCGTAGGGAATCTTCTGCAGTTGAAGGAGAAGAAACCTTACAAGACCTTCGCACGGATGGCTGAGGAACATGGACCCATCTATTCCATCAGAGCCGGTTCTTCCACTATCATTGTTGTCAACTCCGCCGCTATTGCCAAGGAGGCCATGGTGACCAGGTTTAATTCGATTTCAACAAGGAAGCTATCAAAGGCCCTGACGATTCTGACTTCTGATAAATGTATGGTTGCCACAAGCGACTACAATGATTTTCACAAAACGGTCAAAAAACATATTCTTGCAAACGTTTTGGGAGCCAATGCACAGAAGCGGCACCGTCTCCACAGAGAAGACATGTTGGAAAATATTCTGAGCAGTTTCAGTGAACATGTGAAGAGGTTCTCTGATCAGGCAGTTGATTTTAGAAATGTTTTCGTATCTCAACTTTTTATATTAGCACTGAAGCAAGGTCTGGGACGTAATATAGAGTCCATTTATGTTGAGGAGCTTGAGCGCACATTATCAAGAGATGACATATACAAGATTCTAGTGCTTGATATGATGGAGGGAGCCATTGAGGTGGATTGGAGAGATTTCTTTCCATACTTGAAGTGGATTCCTAATAGGAGCGTGGAGAAGAGAATTCAGAATTTGAATTTCCGGAGAGGAGTTGTCATGAGGGCCTTGATGAATGAGCAGAAGAAGAGAATGGCTTCAGGAAAGGTAGAAAATTGTTTTTATGACTACCTGGTAACCGAAGCCAAAGAACTGAATGAACATCAAATTTCCATGCTACTCTGGGAGACAATTGTTGAGACATCTGATACTACATTAGTGACATCAGAATGGGCTATGTATGAACTTGCTAAAGACAAAACTCGTCAGGCCCGTTTGTACAAGGAGCTCCAAAATGTTTGTGGACAAGAAAAGGTTACAGAAGAGCACTTATCTAAGCTACCTTACTTGGGAGCAGTATTCCATGAAACATTAAGGAAGCATAATCCAGCTCCAATCGTGCCAATAAGATATGCTCATGAAAATACAGAATTGGGAGGATATCACATTCCTGCTGGAAGCCAGATTGCAATAAATATATATGGATGCAACATGGACAAGAATAAGTGGGAAAATCCTCTTGAGTGGAAGCCTGAGAGATTTCTTGATGAGAAATATGACCCCTCAGATTTATACAAGACCATGGCCTTTGGAGCTGGGAAGAGGGTGTGTGCAGGTTCTCTTCAGGCCATGTTGATAGCCTGCACAGCAATTGGGAGATTTGTTCAGCAATATGAGTGGGATCTGGGACAGGGGCAGGAGGAGAATGTGGATACAATGTGCCTTACCACCCACAGACTCCAACCCCTGCAAGTAAAACTCAGGCCAAGAAAGGAATACACGAAGTAG 1539 0.4379 MDPLSLLQVLQSHSFATVLAVGASSLLFLILKLRLTGRHARLPSVPAVPGLPVVGNLLQLKEKKPYKTFARMAEEHGPIYSIRAGSSTIIVVNSAAIAKEAMVTRFNSISTRKLSKALTILTSDKCMVATSDYNDFHKTVKKHILANVLGANAQKRHRLHREDMLENILSSFSEHVKRFSDQAVDFRNVFVSQLFILALKQGLGRNIESIYVEELERTLSRDDIYKILVLDMMEGAIEVDWRDFFPYLKWIPNRSVEKRIQNLNFRRGVVMRALMNEQKKRMASGKVENCFYDYLVTEAKELNEHQISMLLWETIVETSDTTLVTSEWAMYELAKDKTRQARLYKELQNVCGQEKVTEEHLSKLPYLGAVFHETLRKHNPAPIVPIRYAHENTELGGYHIPAGSQIAINIYGCNMDKNKWENPLEWKPERFLDEKYDPSDLYKTMAFGAGKRVCAGSLQAMLIACTAIGRFVQQYEWDLGQGQEENVDTMCLTTHRLQPLQVKLRPRKEYTK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1897 512 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 16 508 - -
Pvu5g1897 512 PANTHER ENT-KAURENE OXIDASE, CHLOROPLASTIC 16 508 IPR044225 GO:0005506|GO:0009686|GO:0010241|GO:0020037|GO:0052615
Pvu5g1897 512 SUPERFAMILY Cytochrome P450 41 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 Pfam Cytochrome P450 47 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 Gene3D Cytochrome P450 37 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu5g1897 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1897 Pvu-Chr5 40437581 40441082 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1897 42 508 Cytochrome P450 AT5G25900 63.462 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1897 K04122 - gmx:100802970 779.245