Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1893 ATGGAAACCTTAAAAAGCAAGTCACATAATACAACGTATCATTGTGATTTGGAGGGAAGAAAGATGATCATCAACATCAAGCAATCCACCATGGTGCGTCCGGCGGAGGAGACGCCGCGGAGGCCGCTGTGGAATTCCAACGTCGATTTGGTGGTGCCAAACTTCCACACGCCCAGCGTCTATTTCTATAGGCCAAGCGGAGCCTCCAATTTCTTCGACACCGCCGTCATGAAGGCGGCACTCAGCAAGGCCCTCGTCCCTTTCTACCCAATGGCCGCCCGCCTCCGCCGCGACGACGACGGGCGCATCGAGATTTTCTGCGACGGTCAGGGAGTGCTCTTCGTCGAGGCTGACACCACCGCCGCCATCGACGACTTCGGCGACTTCTCACCCAGCCTTGAGCTCCGGCAGCTCATCCCCGCCGTGGATTATTCTGCCGGGATCGAAACGTATCCGCTCCTAGTTCTACAGGTAACATATTTCAAATGTGGAGGTGTGTCACTGGGTGTTGGTATGCAACACCATGTAGCAGATGGAGCTTCTGGTCTTCACTTCATCAATGCATGGTCAGATCTTGCTCGCGGCTTCGATATTTCCCTCCCTCCATTCATCGACAGAACACTGCTCTGTTCCCGGGATCCACCTCGTCCTGTTTTTGATCACATTGAATACAGGCCTCCACCAGCCATGAACACCACCACCCTGCAACCACCAAAACCAGGCTCTGACGGTGCTGTTGCCGTCTCCACTTTCAAACTGAGCCGTGACCAACTGAACACCCTCAAGGGTAAGTCCAGAGAAGATGGCAACTCAATCAGCTACAGCTCCTATGAGATGCTGGCTGGTCATGTATGGAGAAGTGTGTGCAGGGCAAGAGAACTACCTGATGAACAAGAAACAAAACTGTATATTGCAACTGATGGAAGGTCAAGGCTGCAACCTCCCCTGCCCCCTGGTTACTTCGGCAATGTCATCTTCACCACCACCCCTGTAGCGGTGGCTGGCGATCTCATCTCAAAACCAACATGGTATGCTGCAAGCAGAATCCACGATGCATTGATGAGAATGGACAACGAGTATTTGAGGTCAGCTCTTGACTATCTAGAGGTGCAGCCTGATCTGAAAGCGCTTGTTCGTGGATCACACACTTTCAGGTGCCCAAACCTTGGCATCACTAGCTGGGTGAGGCTTCCAATTCATGATGCTGACTTTGGTTGGGGAAGACCCGTTTTCATGGGACCTGGTGGGATTGCATACGAGGGGCTATCTTTCATTATTCCCAGCTCAACGAACGATGGCACCATGTCTGTGGCAATCGCTCTTCCTCCTGACCGAATGAAAGTGTTTCAGGATTTGTTTTATGACTTTTGA 1371 0.5208 METLKSKSHNTTYHCDLEGRKMIINIKQSTMVRPAEETPRRPLWNSNVDLVVPNFHTPSVYFYRPSGASNFFDTAVMKAALSKALVPFYPMAARLRRDDDGRIEIFCDGQGVLFVEADTTAAIDDFGDFSPSLELRQLIPAVDYSAGIETYPLLVLQVTYFKCGGVSLGVGMQHHVADGASGLHFINAWSDLARGFDISLPPFIDRTLLCSRDPPRPVFDHIEYRPPPAMNTTTLQPPKPGSDGAVAVSTFKLSRDQLNTLKGKSREDGNSISYSSYEMLAGHVWRSVCRARELPDEQETKLYIATDGRSRLQPPLPPGYFGNVIFTTTPVAVAGDLISKPTWYAASRIHDALMRMDNEYLRSALDYLEVQPDLKALVRGSHTFRCPNLGITSWVRLPIHDADFGWGRPVFMGPGGIAYEGLSFIIPSSTNDGTMSVAIALPPDRMKVFQDLFYDF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1893 456 Pfam Transferase family 24 454 - -
Pvu5g1893 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 25 455 - -
Pvu5g1893 456 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 25 455 - -
Pvu5g1893 456 Gene3D - 19 226 IPR023213 -
Pvu5g1893 456 SUPERFAMILY CoA-dependent acyltransferases 232 451 - -
Pvu5g1893 456 Gene3D - 239 456 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1893 Pvu-Chr5 40420239 40423417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1893 22 455 Monolignol Biosynthesis Gene Families AT5G48930 74.654 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1893 K13065 - gmx:100801923 790.801
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1893 5 40420239 40423417 Pvu10g1689 10 43002237 43005277 PCT