Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1892 ATGGCAGATCTCAAGGAGAGGCTGCTACCACCAAAACCTGCTTCGGCTCTTAATGTAAGAGAGATTGCCAATCGACCATCTGCCTCTGGAAGGCAAGGTTTCCAAGGGGTTGATGTTCTGGGGCTAAAGAAGCGAGGCCAAGGTCTCCGATCATGGATTCGTGTTGATACAGCTGGCAACTCTCAAGCCATTGAAGTAGACAAGTTTACCATGATGAGACGTTGTGATCTACCTGCACGTGATCTTCGCCTACTAGATCCTTTGTTTGTCTACCCATCAACAATCCTCGGTAGGGAAAAAGCTATTGTTGTAAATCTGGAGCAGATACGGTGTATCATTACAGCAGATGAAGTTCTTCTCTTGAATTCCCTTGATAGTTATGTATTGCATTATGTAATGGAACTACAGCGACGGTTGACAGCAACTGGGGCAGGGGAGGTTTGGCAGTCAGATGGTTCTGACATGAACCGAAGGAGAGGAAGTAGGAGTCTTGATAATGTATTTAGCAACTCTTCCCCTGATTATTTACCTTTTGAGTTCAGGGCTCTTGAAGTTGCCCTGGAGGCGGCATGCACATTTCTTGATTCTCAGGCAGCAGAGTTAGAAATCGAAGCTTATCCCTTGTTAGATGAACTGACATCAAAGATCAGTACACTAAATTTGGAACGTGTTCGTCGATTAAAAAGCAGACTTGTTGCCCTGACCAGGAGGGTTCAGAAGGTTAGAGATGAAATAGAGCAGCTTATGGACGATGATGGTGACATGGCTGAAATGTATCTTACTGAGAAGAAAAGACGGATGGAGTTGTCATTTTATGGAGATCAGTCTATGGTTGGATATAAATCAGTTGATGGTGCATCCATTTCTGCCCCAGTTTCTCCTGTTTCATCACCACCTGATTCTCGGAAGCTTGAAAAGAGCTTCAGTATTGCTAGGAGTCGACATGAGAGCATGCGAAGTTCTGAAAGTACTACAGAAAGTATAGAGGAACTTGAGATGTTGCTGGAAGCATACTTTGTTGTCATTGACAGCACTCTAAACAAGTTGACATCGTTGAAAGAATACATTGATGACACAGAAGATTTCATAAACATCCAACTGGATAATGTGCGGAATCAGCTTATCCAGTTTGAGCTTTTACTCACAACTGCAACATTTGTGGTTGCCATCTTTGGTGTGGTAGCAGGAATATTTGGGATGAATTTTGAAATTGCATTATTTAATGTCCCTTCTGCTTTCCAGTGGGTCCTAATAATAACAGGAATTTGTGGAGCATTTATATTTTCTGCATTCGTGTGGTTCTTCAAGTACAGAAGACTCATGCCCCTATAG 1332 0.4279 MADLKERLLPPKPASALNVREIANRPSASGRQGFQGVDVLGLKKRGQGLRSWIRVDTAGNSQAIEVDKFTMMRRCDLPARDLRLLDPLFVYPSTILGREKAIVVNLEQIRCIITADEVLLLNSLDSYVLHYVMELQRRLTATGAGEVWQSDGSDMNRRRGSRSLDNVFSNSSPDYLPFEFRALEVALEAACTFLDSQAAELEIEAYPLLDELTSKISTLNLERVRRLKSRLVALTRRVQKVRDEIEQLMDDDGDMAEMYLTEKKRRMELSFYGDQSMVGYKSVDGASISAPVSPVSSPPDSRKLEKSFSIARSRHESMRSSESTTESIEELEMLLEAYFVVIDSTLNKLTSLKEYIDDTEDFINIQLDNVRNQLIQFELLLTTATFVVAIFGVVAGIFGMNFEIALFNVPSAFQWVLIITGICGAFIFSAFVWFFKYRRLMPL* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1892 443 Gene3D - 40 123 - -
Pvu5g1892 443 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 443 IPR039204 -
Pvu5g1892 443 CDD Mrs2_Mfm1p-like 52 440 IPR039204 -
Pvu5g1892 443 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 380 433 IPR045863 -
Pvu5g1892 443 Gene3D Magnesium transport protein CorA, transmembrane region 127 374 - -
Pvu5g1892 443 Gene3D Magnesium transport protein CorA, transmembrane region 381 441 - -
Pvu5g1892 443 PANTHER MAGNESIUM TRANSPORTER MRS2-10 3 443 - -
Pvu5g1892 443 Coils Coil 224 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1892 Pvu-Chr5 40412782 40416941 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1892 1 443 MRS2 Gene Family AT1G16010 85.360 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1892 K16075 - gmx:100779803 774.237