Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1860 ATGTCTAACAGAAACGAGTATTCTTCGTTACCCGTTAATTCCTACTTAGAATTGCAGCGTCAAAACGAGTCCTCAAAAGCCTTTCGCAAGCCTTCTTTTGACGAATCCGAGGTGTATTTGGGATCCAAGAACGAAGATGACGATGACGATTTGGAAATGGACATCGATAATTACCCCCTTGTTGTGGGGTCCAATCAGGGTTCTGGGATACCTGGGGCTGTTTTCAATTTAACAACCACGGTTATTGGGGCAGGGATCATGGCTCTCCCCGCCACTATGAAGGTTCTGGGATTGGTTTTGGGTATTATTTTGATAATTGTCATGGGGATTTTGTCTGAAATTAGTGTGGAATTGTTGGTGAGGTTTTCTGTTTTGTGTAAGGCGTCGTCGTATGGGGAGGTTGTTCAGCACGCAATGGGGAGGCCTGTGAGGATTTTGTCTGAAATCTGCATTATTTTGAACAATGCGGGTGTTTTGGTGGTTTACTTGATAATCATGGGGGATGTTATGTCTGGTTCCACTCACCATATGGGGGTTTTTGATCAGTTGATGGGGAATGGTGCGTGGGATCAGAGGAAGATTGTGGTTTTAGTTGTCATGGTGGTTTTCCTTGCTCCTCTTTGTTCACTTGACAAGATTGATTCATTGAGCTTGACCTCCGCAGCCTCTGTGGCTCTTGCTGTGTTGTTTGTGATTGTTGCTTTTACTGTTGCTTCCATCAAGCTTGTTGAAGGACGCATTGATTCTCCCAGGATGGCTCCTGATCTTAGCTCCAAAACTGCAATTTTGGATTTTCTTGTTGCGATACCCATCATGACCAATGCATATGTTTGCCATTTTAATGTGCAGCCTATATACAATGAGCTTGAACAACGGTCTCCTCAGAAGATGAACCGAGTTGGGAGGTACACTACAATTTTGTGCATCCTTGTTTATTCTTCCACTGCTATATCTGGTTACCTGCTCTTTGGGAAAGATACAGAGGCTGATGTGCTGACTAATTTTGATAAGGATCTTGGAATTCGGTATAGCGCGGTCTTGAACTATATTGTTCGGATTGGCTACATTCTTCATTTGATACTTGTTTTCCCTGTGATTCATTTCTCACTGCGCCAAACAGTGGACACATTGGTGTTTGAGGGATCACCTCCTCTTTCAGAAAGTAGGAAGAGATCTTTGGGGTTGACTGCGGTTCTGTTGGTGCTCATATATATTGGGTCTACTATGATTCCAAATATATGGACAGCTTTCAAGTTCACTGGGGCAACCACTGCTGTTTCATTGGGTTTTATATTTCCTTCTCTTGTTTCACTGAGACTGAGTCATCTAGGAGATATAACCTACGGGGAGTGGTTTTTTTCATGGTTGATGTTGATATTGGCTGTGACTGTTAGCGTAGTAGGAGTTGTTAGCAATATCTATAGCCTTGAGAGCAAGTCTTAG 1443 0.431 MSNRNEYSSLPVNSYLELQRQNESSKAFRKPSFDESEVYLGSKNEDDDDDLEMDIDNYPLVVGSNQGSGIPGAVFNLTTTVIGAGIMALPATMKVLGLVLGIILIIVMGILSEISVELLVRFSVLCKASSYGEVVQHAMGRPVRILSEICIILNNAGVLVVYLIIMGDVMSGSTHHMGVFDQLMGNGAWDQRKIVVLVVMVVFLAPLCSLDKIDSLSLTSAASVALAVLFVIVAFTVASIKLVEGRIDSPRMAPDLSSKTAILDFLVAIPIMTNAYVCHFNVQPIYNELEQRSPQKMNRVGRYTTILCILVYSSTAISGYLLFGKDTEADVLTNFDKDLGIRYSAVLNYIVRIGYILHLILVFPVIHFSLRQTVDTLVFEGSPPLSESRKRSLGLTAVLLVLIYIGSTMIPNIWTAFKFTGATTAVSLGFIFPSLVSLRLSHLGDITYGEWFFSWLMLILAVTVSVVGVVSNIYSLESKS* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1860 480 Pfam Transmembrane amino acid transporter protein 69 471 IPR013057 -
Pvu5g1860 480 PANTHER AMINO ACID TRANSPORTER 33 479 - -
Pvu5g1860 480 PANTHER BNAC06G40470D PROTEIN 33 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1860 Pvu-Chr5 40171852 40173294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1860 5 480 Amino Acid or Auxin Permease AAAP Family AT1G80510 71.399 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1860 - - gmx:100791860 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1860 5 40171852 40173294 Pvu5g1860 5 40171852 40173294 ECH