Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1845 ATGGCTTTTTGCCCAATCTTTTGCTGCGGAAATGGTTCGGATCGAAAAGGAAGAGGGAAGAAACAACCTCCTTGGCGGGTGTTTTCTTTGAAGGAATTGCACTCAGCTACTAATAATTTCAACTATGATAACAAGCTAGGGGAAGGGGGATTTGGCAGTGTGTACTGGGGCCAGCTTTGGGATGGATCGCAGATTGCAGTGAAAAGATTGAAAGTTTGGAGCAACAAAGCAGACATGGAATTTGCTGTTGAAGTTGAGATATTGGCTAGAGTCCGTCACAAGAATCTTCTCAGCCTACGTGGCTATTGTGCTGAAGGTCAGGAACGGTTAATTGTATATAATTATATGCCAAATTTGAGCTTGCTCTCTCATCTTCATGGACAGCACTCAGCAGAATCCCTTCTTGATTGGAACCGGCGGATGATCATCGCAATCGGGTCTGCCGAGGGAATTGCATATCTTCACCTCCAGGCAACACCACACATCATCCACAGAGATATCAAGGCAAGCAATGTGTTGTTGGATTCAGATTTTCAGGCACGAGTTGCTGATTTTGGTTTTGCAAAGTTGATCCCTGATGGGGCAACACATGTGACTACTAGAGTTAAGGGCACCCTAGGCTACCTTGCACCTGAATATGCTATGCTAGGTAAAGCAAATGAGAGTTGTGATGTCTACAGTTTCGGAATTCTCCTTCTAGAACTTGCTAGTGGGAAAAAGCCACTTGAAAAACTTAGTTCTACGGTAAAGAGATCAATAAATGACTGGGCACTTCCATTGGCTTGTGAGAAGAAGTTTAGTGAGCTAGCAGATCCAAAACTGGAGGGTAACTATGTGGAGGAAGAGCTTAAAAGGGTCGTTTTAATTGCTCTATTATGTGCTCAGAGTCAGGCAGAGAAGAGGCCCACCATACTTGAGGTTGTAGAACTACTGAAGGGAGAATCCAAAGATAAGTTAGTTCAGCTGGAAAATAATGAAATCTTTAAGAACCCTCCTGCAGCACATACTGATGATGAGAACTTTGCAGCTGAAGGCAGTTCAGATTTCATCTCAGAAGAGAAAGAATCAAAACCTGAGGTGGAAGACAAAACTGGGGCATGA 1101 0.4369 MAFCPIFCCGNGSDRKGRGKKQPPWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHKNLLSLRGYCAEGQERLIVYNYMPNLSLLSHLHGQHSAESLLDWNRRMIIAIGSAEGIAYLHLQATPHIIHRDIKASNVLLDSDFQARVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKANESCDVYSFGILLLELASGKKPLEKLSSTVKRSINDWALPLACEKKFSELADPKLEGNYVEEELKRVVLIALLCAQSQAEKRPTILEVVELLKGESKDKLVQLENNEIFKNPPAAHTDDENFAAEGSSDFISEEKESKPEVEDKTGA* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1845 366 PANTHER OS01G0750732 PROTEIN 1 363 - -
Pvu5g1845 366 MobiDBLite consensus disorder prediction 329 366 - -
Pvu5g1845 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Pvu5g1845 366 MobiDBLite consensus disorder prediction 348 366 - -
Pvu5g1845 366 Gene3D Phosphorylase Kinase; domain 1 13 115 - -
Pvu5g1845 366 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1845 366 Gene3D Transferase(Phosphotransferase) domain 1 116 329 - -
Pvu5g1845 366 SUPERFAMILY Protein kinase-like (PK-like) 22 311 IPR011009 -
Pvu5g1845 366 PANTHER BNAA05G14800D PROTEIN 1 363 - -
Pvu5g1845 366 Coils Coil 305 325 - -
Pvu5g1845 366 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Pvu5g1845 366 ProSiteProfiles Protein kinase domain profile. 40 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1845 366 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1845 Pvu-Chr5 40087221 40090369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1845 28 314 Trihelix Transcription Factor Family AT1G70460 51.203 1.19e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Pvu5g1845 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1845 - - gmx:100788153 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1845 5 40087221 40090369 Pvu10g1623 10 42496632 42499713 PCT