Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1839 ATGATGGACATGTTAAGATGGGGAACCTTGGTTTTCTGTGTGTTCCTTTTGTTTAGTACCTGTTTGGCAAAAGATCAACACATTATTCGGATATATCCTGGTTTCAGTGCTTCTCAACCTGATTGGAGCGACCATAATGGTTTTTTCTTGGTATCCAACAGCTCAGCTTTCGCTTTTGGATTCTTCACTACTCTTGATGTTTCATCGTTTGTCTTAGTTGTCTTGCACTTGAGCAGCTACAAAGTGGTTTGGACTGCCAACAGAGGCTTACTTGTTGGGAAATCTGCTAAATTTGAGCTTGACCTTAGTGGGAATGCGTATTTGGAAGGTGATGGCGGTGTGGTTTGGGCAACAAATACAACAGGGCAGAAAGTGAGAGCCATGGAGTTGCAAGACTCAGGGAATTTGGTGTTGGTTGGGGATAATGGGAGAGCTATTTGGCAAAGTTTTAGCCATCCCACTGATACCCTTTTGCCTGGTCAACACTTTGTGGAGGGAATGACCCTCAAAAGCTTCCACAACACCTTGAACATGTATTATTATCTTGGTTATAAGCAAGGTGATTTGTTTCTCTATGCAGGATTTGAAACTCCACAAGTGTACTGGTCCCTGTCAGGAGAAGAGGGTGATGCTCAGAGAATCTCAAAAAATATCACTACCAAGGTTCACTCAGCTTCTTTGGTGTCCAATTCATGGAGATTTTATGACAAAGATCAAGTTTTGCTGTGGAAAATTGACTTCTCTGACACCTCAGATCCCAACTCATTGTGGGCTGCAACCTTGGATCCAACTGGTGCTATCACTTTTTATGATCTCAACAAAGGGAGGTCTCCTAACCCTGATGCAGTTAAGGTACCAAAAGACCCCTGTGGCACTCCCCTGCCTTGTGATTCCTACTATGTTTGCTTCTTTCAAAACTGGTGCATCTGCCCCAAACTTCTCAAATCTAGTTTTAACTGCAAACCTCCCAACATCTCCACCTGTTCCACTACATCAAAAGAACTTGTTTTTGTGGGTGAAAAGCTTGATTATTTTGCTCTCAAGTACACTACACCGGTCTCAAAATCCACCCTCAGTTCTTGCAAAGAGGGTTGTTTAGGAAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAACAGCACCGGTAGATGCTTTCATTTTGATGAGACTGGGAGTTTCCAACGCAGTAAGGGGGGCGATGGTGGTTATGTTTCATTCATGAAGGTCTCCATTAGTAGTGATGATGGAGTACATAGTAACAAAAATGGAAGGAATGACACTGTGCTAGTTGTAGTCATAGTGATTCTCACAGTTCTGGTTATTGTTGGTCTTGTCACAGGATTCAGGTACTACTACAAGAAGAAGAATGTTGCAAGGTACCCTCAAGACACCTTTGAGGAAGATGATGATTTCTTGGAGAGTATCTCAGGGATGCCTGCACGTTTTACTTTTGCTGCTCTTTGTAGAGCAACCAAGGACTTTTCCACAAAGATTGGAGAAGGAGGTTTTGGCTCAGTGTATTTAGGTGAGCTTGAAGATGGCACCCAATTGGCTGTGAAAAAGTTGGAAGGTGTTGGACAAGGAGCAAAAGAGTTCAAAGCAGAAGTGTCCATAATTGGAAGTATTCACCATGTTCATTTGGTGAAGCTCAAAGGGTTCTGTGCTGAGGGTCCTCATCGCCTTCTTGTGTATGAATACATGGCAAGGGGTTCTTTGGACAAATGGATCTTCAAGAACAGTGAGAACAGTTTCTTGCTGAACTGGGAGACAAGGCACAACATTGCAATAGGCACGGCTAAGGGATTGGCCTATCTCCACGAGGAGTGTGAAGTGAGGATCATCCACTGTGACATCAAGCCACAGAATGTTCTTCTTGATGATAACTTCACAGCAAAGGTTTCAGATTTTGGATTGGCCAAGCTAATGAGCCGTGAGCAGAGCCATGTGTTCACAACTATGAGAGGCACAAGAGGGTATTTGGCACCAGAATGGATTACTAACTATGCAATTTCGGAGAAGAGTGATGTGTTCAGCTATGGCATGCTCTTGCTTGAGATAATAGGAGGGAGGAAGAACTATGATCAGTGGGAAGGGGCTGAGAAGGCACATTTTCCTTCCTATGTGTTCAGAATGATGGATGAAGGGAAACTGAGAGAAGTTGTTGATCCAAAGATAGATGTTGATGAGAAGGATGAAAGGGTTGAAGCTGCTCTAAAAGTTGGTCTTTGGTGCATACAAGATGATGTGAGTTTGAGGCCTTCAATGGCAAAAGTAGCTCAAATGCTTGAAGGGTTGTGCCATGTACCTGATCCACCATCATTATCTCAAGCTGGTACTTATTCAGCTTTCATGAAATTGAGCAGTGGAGAAGCTACTTCATCACAGGCTAGTTTTTTTAGCAATGTACCAATGTCATGTGTTCAATTATCAGGACCAAGATGA 2439 0.4309 MMDMLRWGTLVFCVFLLFSTCLAKDQHIIRIYPGFSASQPDWSDHNGFFLVSNSSAFAFGFFTTLDVSSFVLVVLHLSSYKVVWTANRGLLVGKSAKFELDLSGNAYLEGDGGVVWATNTTGQKVRAMELQDSGNLVLVGDNGRAIWQSFSHPTDTLLPGQHFVEGMTLKSFHNTLNMYYYLGYKQGDLFLYAGFETPQVYWSLSGEEGDAQRISKNITTKVHSASLVSNSWRFYDKDQVLLWKIDFSDTSDPNSLWAATLDPTGAITFYDLNKGRSPNPDAVKVPKDPCGTPLPCDSYYVCFFQNWCICPKLLKSSFNCKPPNISTCSTTSKELVFVGEKLDYFALKYTTPVSKSTLSSCKEGCLGNCSCLVLFFENSTGRCFHFDETGSFQRSKGGDGGYVSFMKVSISSDDGVHSNKNGRNDTVLVVVIVILTVLVIVGLVTGFRYYYKKKNVARYPQDTFEEDDDFLESISGMPARFTFAALCRATKDFSTKIGEGGFGSVYLGELEDGTQLAVKKLEGVGQGAKEFKAEVSIIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLDKWIFKNSENSFLLNWETRHNIAIGTAKGLAYLHEECEVRIIHCDIKPQNVLLDDNFTAKVSDFGLAKLMSREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVFSYGMLLLEIIGGRKNYDQWEGAEKAHFPSYVFRMMDEGKLREVVDPKIDVDEKDERVEAALKVGLWCIQDDVSLRPSMAKVAQMLEGLCHVPDPPSLSQAGTYSAFMKLSSGEATSSQASFFSNVPMSCVQLSGPR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1839 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Pvu5g1839 812 ProSiteProfiles PAN/Apple domain profile. 328 409 IPR003609 -
Pvu5g1839 812 CDD B_lectin 46 153 IPR001480 -
Pvu5g1839 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 812 - -
Pvu5g1839 812 SUPERFAMILY Protein kinase-like (PK-like) 474 763 IPR011009 -
Pvu5g1839 812 SMART serkin_6 491 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1839 812 Pfam D-mannose binding lectin 82 163 IPR001480 -
Pvu5g1839 812 SMART blect_4 41 153 IPR001480 -
Pvu5g1839 812 PIRSF SRK 1 809 IPR024171 GO:0004674
Pvu5g1839 812 CDD STKc_IRAK 497 764 - -
Pvu5g1839 812 Gene3D Transferase(Phosphotransferase) domain 1 566 766 - -
Pvu5g1839 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 204 IPR036426 -
Pvu5g1839 812 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 4 812 - -
Pvu5g1839 812 ProSitePatterns Protein kinases ATP-binding region signature. 497 520 IPR017441 GO:0005524
Pvu5g1839 812 Gene3D Phosphorylase Kinase; domain 1 457 565 - -
Pvu5g1839 812 ProSiteProfiles Bulb-type lectin domain profile. 35 151 IPR001480 -
Pvu5g1839 812 ProSiteProfiles Protein kinase domain profile. 491 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1839 812 Pfam Protein kinase domain 494 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1839 812 Gene3D - 41 152 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1839 Pvu-Chr5 40052883 40055907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1839 435 771 Receptor kinase-like Gene Family AT5G20050 43.978 9.49e-88 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pvu5g1839 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1839 - - gmx:100786024 1392.1