Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1814 ATGCATGAACACACATTGAGAAGTATAAAGCACCGCAAAGCACACCATTTGCGTGACTCACTCTTTCTCTGTCTCTTCCTCTTCTTCTCTTCCATGGACGATTTTCTGCATCGAGTTTGCCCTAATTCTCCATTCATTTGGGATGGAGAGAGGTTTTCTGACTGCTTTGAAGACATTGTTTTAGGTTTTGCAGTTAACATAGTGACGGTTGTTATGGTCGTTGTGCCTGGATTTAGTCAGAAGATTGGTCGAGGAGTTCGAAGGTCAGATGGCCAGATGACCTTTCAAGAAAAATTTGTCCTGGATTTTATACCAGCTGTTGGAGCATGTCTTTCAATTGTAGACATATTTTTTCAGTGGAAGAAAGAGCATAGTAGTCACTTTGTTGGATATCATAAATGGTTCTATAGCTGTTCTGAGTTGATGGTGTGGATAAATATTATTTTCTTCACAAAGTGTGCCAGCAGTCATCACATTGTCTTCAATCGTGTCTTATGTTTCTGGTGGATTCCGAAAGCAATATTGGCAGTTTTATATTTGATGACAAAGATTTCATCATTGAAGGTTTCAATATGCATCATCGAAAGTTTAGTTGTTCTCTTGAATATCTCATTTGGCATAGCCATCAATGTGATTAGGATAAAGAGACCATCTTACAAAAGCAGTGTTTTGGAAGATCCACTTCTTTCAAATGGCGTGGACCTTGAGGAAGGTGGTTATGAAGACCTTGGAAATGATGGAAACTTTTGGGATTTGATGACTTTCAACTTCATAACTCCAGTAATGAATCATGGTGTGGTAAAACAATTAGACTATGATGACCTATTGCCACTACCTACTGATATGGGTCCTTCTTCCTGTCATGATGTGATTTTATCCTGCTGGCAAGCTCAACTGAGTAACAATGGTTCTAACGCATCTTTATTTAGAGCACTATGTAGTGCATATGGATGGCCATATCTCCGCCTGGGTTTATTAAAGGTGATTAATGATTGTATTGGTTTTGCGGGACCATTGCTTCTCAATAAGCTGATCCAGTTTCTTCAACAAGGTTCAGCGAATTTGGATGGGTATTTACTTGCATTATCCTTGGGGCTCACCTCTATAATTAAATCCTTTTTAGATACACAATATACTTTTCATCTTTCCAAACTGAAGCTGAAGCCGCGATCTAGTATCATGACTCTAATCTATGAGAAGTGTCTACGTTTGAACTTAGCAGAGCGTTCAAAATTTACAAATGGAGAAATTCAGACATTTATGTCAGTAGATGCTGACCGAACTGTGAACTTGTGTAATAATTTCCATGATATGTGGAGCCTGCCTCTACAAATTGGAGTGGCTCTGTATCTTTTGTATACTCAAGTCAAATTTGCATTTGTATCTGGATTAGCAATAACTATTTTATTGATACCAGTGAATAAATGGATAGCGCAATTGATTGCAAGGGCTACTGAGCAGATGATGAAGGAGAAAGATGAAAGGATTCGTAAGACAGGAGAACTTTTGACGTATATTCGCACTTTGAAGATGTATGGATGGGAACTTCTTTTTTCTAGTTGGTTGATGAATACAAGATCTTTGGAAGTCAAACACTTAGCTACTCGAAAGTACCTGGATGCATGGTGTGTTTTCTTTTGGGCTTCAACACCAACGCTCTTTTCTCTTTTCACATTTGGACTTTATGCATTGATGGGACATCAACTTGATGCTGCAATGGTTTTCACTTGTCTTGCTTTGTTCAACACCCTTATTTCTCCACTAAATTCATTCCCTTGGGTAATTAATGGATTGATTGATGCCATCATATCTTCCAGACGGTTGAGTAGGTTTCTCGCGTGTCCTGAACATAAAGTTGAAGTGGGAGACACGAGTTCATTCCTAAGTGAAAAGCTTGATTCTGTACAAGGTTTGGGTGTATTTATCCAAGATGCATGTTGTACTTGGTCAAGCAGTGAGGAACAAACATTAAATTTGGTGTTGAATCATGTGACTCTAAGTGTGTCCCAGGGTTCCTTTGTTGCAGTTATTGGCGAGGTTGGTTCAGGTAAATCATCCCTGTTATATTCAATTCTTGGAGAAATGCAGCTTGTTCGTGGCTCTATTTATTCCAATGAATCCATTGCTTATGTACCTCAGGTCCCTTGGATTTTATCTGGAACGGTGCGGGACAACATATTATTTGGGAAAAGCTATGATCCTGAAAGGTATACTGATACACTGAAGGCATGTGCATTAGATGTTGATGTCTCATTGATGATTGGAGGTGACATGGCTTATATTGGAGAGAAAGGAGTCAACTTATCGGGTGGACAGAGAGCACGTCTTGCTTTGGCAAGGGCATTGTATCATGACTCAGCTGTTGTTATGCTTGATGATGTCCTGAGTGCAGTAGATGTACAAGTTGCTCAATGTATCTTATACAAGGCCATTCTAGGTCCCCTTATGCAGAGAAAAACTCGATTGCTCTGTACCCATAACATTCAGGCAATATCTTCTGCTGATAAGATTGTTGTAATGGAGAAGGGACACATAAAGTGGATGGGAAATTCACATGACTTTCCAATTAATTCATTTACAGAATTCTCTCCGTTGAATGAAATTGATTCAGCTTTACAGAATCATAGACAATCTTGCAGCCCAAATCTTTCTTCCAAATCCAAGGAGCAGTCTCTTCTTGATACAGGTATTGTGCATGATCTGGAGGGAGCACAGGAGATAGTTGAAGTTGAGTTGAGGAAAGAGGGAAAAGTTGAGATTGGAGTGTATAAGAATTATGCTGTCTTCACTGGCTGGTTCATGACAGTCATTATATGCCTATCAGCTATTCTGATGCAAGCTTCTCGTAATGGAAATGATTTATGGCTTTCATATTGGGTTGATACAACAGCAGAAGGCAGTCAGACAAGATATTCCATCTCCTTCTATCTGGCTATACTATGTCTCTTTTGTATTATTAATTCCCTTTTCACATTGGTGAGGGCATTCTCTTTTGCATTTGGTGGATTACAAGCTGCAACTAAGGTACACAATAAATTGCTCAACAGGCTTATGAATGCACCTGTCCAATTCTTTGATCAGACCCCTGGTGGGAGAATACTGAACAGGTTATCTTCAGATCTTTATACCATTGATGATTCACTTCCATTCATTCTGAACATTCTCCTAGCTAATTTCGTAGGCTTGTTGGGTATTACAATAATTTTGTGTTACGTACAGGTCTTCTTCTTACTCTTGCTATTACCATTTTGGTATATCTACAGTAGACTTCAGTTCTTCTACAGGTCAACATCAAGAGAATTACGAAGACTGGATAGTGTTTCTCGTTCTCCAATATACTCATCTTTCACTGAAACACTTGATGGATCATCAACTATTAGGGCGTTTAAATCTGAGGACTTTTTCTTTACCAAATTCACTGAACATATAACGTTGTATCAGAAGACTTCCTACACAGAGATAGTGGCAAGTTTGTGGCTTTCCTTGCGTCTCCAGTTATTAGGTGCATTTATCATCTCCTTCATAGCTGTGATGGCTGTTATTGGATCTCATGGCAGTCTGCCCATCAACTTTGGTACCCCAGGACTGGTAGGATTGGCCCTCTCATATGCAGCTCCAATTGTGTCCTTATTGGGGAGTTTTTTATCAAGCTTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAACTCTTCAATACATGGACATTCCTCAAGAAGAACAAACTGGATGCCTATACTTGAATCCAGATTGGCCAAATCAAGGATTTATCGAATTCCAGTGTGTTACTTTGAAATATATACCATCTTTGCCAGCTGCACTCTGCAATCTTAGTTTTAGAATTGCTGGAGGGACACAAGTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCCAGTGTGTTAAATGCTCTTTTCCGTCTTACTCCAATATGTACAGGCTCTATCTCAATTGATGGCGTGGATATTAAAAATATTCCGGTCAGAGAACTACGTACACATTTGGCCATTGTTCCTCAGAGTCCATTTTTGTTCGAAGGATCATTAAGGGATAACCTAGATCCTTTCAAAATGAATGATGACTTAAAAATTTGGAATGCATTGGAAAAGTGCCATGTGAAAGAGGAAGTAGAAGTAGCTGGAGGGCTGGACCTTCTTGTAAAGGAAGGAGGGATGCCATTTTCAGTTGGCCAGCGACAACTTCTTTGCCTCGCACGTGCACTTTTGAAATCTTCCAAGGTTCTCTGTTTGGATGAATGCACAGCCAATGTAGACATTCAAACTGCTTCACTGCTGCAAACTACCATATCTGGAGAATGCAAAGGAATGACAGTCCTCACAATTGCTCACCGGATTTCAACTGTTGTAAATATGGACAACATTCTGATTCTTGACCACGGGAAACTGGTTGAACAGGGTAACCCACAGGTTCTTCTGAAAGACGACAGCTCGATATTTTCTACTTTTGTTAGAGCTTCAGCAATGTAG 4488 0.3955 MHEHTLRSIKHRKAHHLRDSLFLCLFLFFSSMDDFLHRVCPNSPFIWDGERFSDCFEDIVLGFAVNIVTVVMVVVPGFSQKIGRGVRRSDGQMTFQEKFVLDFIPAVGACLSIVDIFFQWKKEHSSHFVGYHKWFYSCSELMVWINIIFFTKCASSHHIVFNRVLCFWWIPKAILAVLYLMTKISSLKVSICIIESLVVLLNISFGIAINVIRIKRPSYKSSVLEDPLLSNGVDLEEGGYEDLGNDGNFWDLMTFNFITPVMNHGVVKQLDYDDLLPLPTDMGPSSCHDVILSCWQAQLSNNGSNASLFRALCSAYGWPYLRLGLLKVINDCIGFAGPLLLNKLIQFLQQGSANLDGYLLALSLGLTSIIKSFLDTQYTFHLSKLKLKPRSSIMTLIYEKCLRLNLAERSKFTNGEIQTFMSVDADRTVNLCNNFHDMWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIAQLIARATEQMMKEKDERIRKTGELLTYIRTLKMYGWELLFSSWLMNTRSLEVKHLATRKYLDAWCVFFWASTPTLFSLFTFGLYALMGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAIISSRRLSRFLACPEHKVEVGDTSSFLSEKLDSVQGLGVFIQDACCTWSSSEEQTLNLVLNHVTLSVSQGSFVAVIGEVGSGKSSLLYSILGEMQLVRGSIYSNESIAYVPQVPWILSGTVRDNILFGKSYDPERYTDTLKACALDVDVSLMIGGDMAYIGEKGVNLSGGQRARLALARALYHDSAVVMLDDVLSAVDVQVAQCILYKAILGPLMQRKTRLLCTHNIQAISSADKIVVMEKGHIKWMGNSHDFPINSFTEFSPLNEIDSALQNHRQSCSPNLSSKSKEQSLLDTGIVHDLEGAQEIVEVELRKEGKVEIGVYKNYAVFTGWFMTVIICLSAILMQASRNGNDLWLSYWVDTTAEGSQTRYSISFYLAILCLFCIINSLFTLVRAFSFAFGGLQAATKVHNKLLNRLMNAPVQFFDQTPGGRILNRLSSDLYTIDDSLPFILNILLANFVGLLGITIILCYVQVFFLLLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYSSFTETLDGSSTIRAFKSEDFFFTKFTEHITLYQKTSYTEIVASLWLSLRLQLLGAFIISFIAVMAVIGSHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLSSFTETEKEMVSVERTLQYMDIPQEEQTGCLYLNPDWPNQGFIEFQCVTLKYIPSLPAALCNLSFRIAGGTQVGIIGRTGAGKSSVLNALFRLTPICTGSISIDGVDIKNIPVRELRTHLAIVPQSPFLFEGSLRDNLDPFKMNDDLKIWNALEKCHVKEEVEVAGGLDLLVKEGGMPFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLQTTISGECKGMTVLTIAHRISTVVNMDNILILDHGKLVEQGNPQVLLKDDSSIFSTFVRASAM* 1496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1814 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 656 853 IPR027417 -
Pvu5g1814 1495 CDD ABC_6TM_MRP7_D1_like 323 608 - -
Pvu5g1814 1495 Pfam ABC transporter transmembrane region 324 588 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu5g1814 1495 Pfam ABC transporter transmembrane region 936 1185 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu5g1814 1495 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1258 1491 IPR003439 GO:0005524
Pvu5g1814 1495 Gene3D - 638 876 IPR027417 -
Pvu5g1814 1495 CDD ABCC_MRP_domain2 1256 1475 - -
Pvu5g1814 1495 CDD ABC_6TM_MRP7_D2_like 935 1235 - -
Pvu5g1814 1495 Gene3D ABC transporter type 1, transmembrane domain 309 616 IPR036640 GO:0005524|GO:0016021
Pvu5g1814 1495 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 936 1223 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu5g1814 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1252 1483 IPR027417 -
Pvu5g1814 1495 Gene3D - 1245 1493 IPR027417 -
Pvu5g1814 1495 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 226 1475 - -
Pvu5g1814 1495 Pfam ABC transporter 661 793 IPR003439 GO:0005524
Pvu5g1814 1495 Pfam ABC transporter 1276 1422 IPR003439 GO:0005524
Pvu5g1814 1495 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 640 867 IPR003439 GO:0005524
Pvu5g1814 1495 ProSitePatterns ABC transporters family signature. 1394 1408 IPR017871 GO:0005524
Pvu5g1814 1495 PANTHER MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 226 1475 - -
Pvu5g1814 1495 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524
Pvu5g1814 1495 Gene3D ABC transporter type 1, transmembrane domain 903 1242 IPR036640 GO:0005524|GO:0016021
Pvu5g1814 1495 SUPERFAMILY ABC transporter transmembrane region 932 1240 IPR036640 GO:0005524|GO:0016021
Pvu5g1814 1495 SMART AAA_5 670 844 IPR003593 -
Pvu5g1814 1495 SMART AAA_5 1284 1462 IPR003593 -
Pvu5g1814 1495 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 325 600 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu5g1814 1495 SUPERFAMILY ABC transporter transmembrane region 309 608 IPR036640 GO:0005524|GO:0016021
Pvu5g1814 1495 CDD ABCC_MRP_domain1 642 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1814 Pvu-Chr5 39878543 39893204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1814 631 895 Calmodulin-binding Proteins AT2G36910 27.526 1.98e-18 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1814 K05674 - gmx:100814181 2601.24