Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1801 ATGGAAAGCTTAAAAGCACCTTTCAAGGGTGTTAAAAACGACCTTCGAGGAAGAGCTCTGCACTATAAAGATGATTGGACAACTGGTCTCTACTCAGGAGCAGGAATATTAGCCCCAACTACCTATATTTTCTTTGCTTCTGCTCTTCCAGTTATTGCCTTTGGCGAGCAGCTAAGCAGAGACACAGATGGAAGCTTGAGTACGGTAGAAACGCTGGCTTCTACAGCTATTTGTGGAATTGTACACTCAATTTTGGGTGGCCAGCCTCTCTTAATAGTAGGAGTTGCTGAACCCACTATCATTATGTACACCTATTTGTACAACTTTGCCAAAGATAAGGATTCCTTGGGACGAGAACTCTTTCTAGCTTGGGCAGGATGGGTTTGTGTATGGACTGCTCTCTTGCTGTTTCTTCTAGCAATATTCAATGCTGGAAATATCATCAATAAATTTACAAGGATCGCTGGTGAGCTTTTTGGCATGTTGATCACAGTCTTGTTCCTTCAAGAGGCTATAAAGGGAATTGTAAGTGAGTTCAAAGTTCCTAAAGAGGGAGACCCAATATCGGAAAAGTACCATTTTCATTGGCTGTATGCAAATGGATTGCTGGGCATTATTTTCACCTTTGGCCTTCTCTATACGTCTTTAAAGAGCAGAAAAGCAAGGTCATGGTTATATGGCACAGGGTGGTTTAGAAGTTTCGTTGCAGACTATGGGGTGCCTTTAATGGTGGTGGTGTGGACAGCACTATCATTCATAGTACCGAGTAAAGTGCCTTCTGGAGTTCCCAGAAGGCTCACCTCTCCTCTTGTTTGGGACTCTACATCTTTACATCACTGGACAGTAATCAATGATATGGGGAAGGTTTCTCCTTCTTATATTTTTGCTGCTTTTATTCCCGCCTTAATGATAGCGGGGCTTTACTTCTTTGACCATAGTGTTGCTTCCCAGTTGGCACAACAGAAGGAATTCAATCTCAAGAAACCTTCTGCATACCACTATGACATATTGTTGCTAGGACTAACGACTTTGCTTTGTGGATTAATTGGCTTACCACCTTCAAATGGAGTTCTTCCTCAATCTCCTATGCACACCAAGAGCCTGGCTGTTCTCAAGAAACAGTTGATCCGAAGAAAGATGGTTAAAAGTGCCAAGGAAAGCATAAATCAGAAAGCTAGCAATTCTGAAATCTATGGGAAGATGCAAGCAGTGTTCATAGAAATGGATAACTGTCCAGATAATCATTCAGTCGTCAAAGAACTAGAGGATTTGAAAGAGGTTGTCTTAAACGGTGAAGACAAAGGAGTTGACAACAAGAGTAACTTTGATCCTGAGAAACACATTGATGCATATTTGCCTGTCAGAGTAAAGGAGCAGAGAGTGAGCAATCTTTTACAATCAATCCTTATAGGAGCATCCATCTTTGGCATGCCTGTCATAAAACAGATACCAACTTCAGTTCTGTGGGGATATTTTGCTTACATGGCCATTGATAGTCTTCCAGGAAATCAATTCTGGGAAAGGTTGCTACTCCTTTTTGTAAGACCTAGTAGGTGGTACAAGTTGTTGGAGGGGGATCATGCTTCCTTTGTTGAGTCAGTACCTCACAAATACATAGTAGCCTTCACAATCTTCCAATTTGTGTATTTCTTGGTTTGCTTTGGAGTGACATGGATTCCCATAGCTGGAATACTGTTCCCCTTGCCTTTCTTTTTCCTGATCACACTGAGGCAGCATATACTCCCCAAGCTGTTCAAGCCTCACCATCTTAGGGAACTAGACGCAGCTGAATATGAAGAAATAGTTGCTGCTCCAGGACTAACTTTCAATAGGTCCTTCAGGGAGATGGAATCACCAGGAGTTGGATCAGTAGAAATAGTTAATGCTGAAATATTAGATGAGTTAACTACAAATAGAGGGGAGTTGAAGGTCAGAACTGTCAGCTTCACTGAGGAAAGAAATCACCAGATACACCCTGATGAAAATGGATCCCAGGCACAGATTGTTAGTGATGGAAGGTGA 2022 0.4194 MESLKAPFKGVKNDLRGRALHYKDDWTTGLYSGAGILAPTTYIFFASALPVIAFGEQLSRDTDGSLSTVETLASTAICGIVHSILGGQPLLIVGVAEPTIIMYTYLYNFAKDKDSLGRELFLAWAGWVCVWTALLLFLLAIFNAGNIINKFTRIAGELFGMLITVLFLQEAIKGIVSEFKVPKEGDPISEKYHFHWLYANGLLGIIFTFGLLYTSLKSRKARSWLYGTGWFRSFVADYGVPLMVVVWTALSFIVPSKVPSGVPRRLTSPLVWDSTSLHHWTVINDMGKVSPSYIFAAFIPALMIAGLYFFDHSVASQLAQQKEFNLKKPSAYHYDILLLGLTTLLCGLIGLPPSNGVLPQSPMHTKSLAVLKKQLIRRKMVKSAKESINQKASNSEIYGKMQAVFIEMDNCPDNHSVVKELEDLKEVVLNGEDKGVDNKSNFDPEKHIDAYLPVRVKEQRVSNLLQSILIGASIFGMPVIKQIPTSVLWGYFAYMAIDSLPGNQFWERLLLLFVRPSRWYKLLEGDHASFVESVPHKYIVAFTIFQFVYFLVCFGVTWIPIAGILFPLPFFFLITLRQHILPKLFKPHHLRELDAAEYEEIVAAPGLTFNRSFREMESPGVGSVEIVNAEILDELTTNRGELKVRTVSFTEERNHQIHPDENGSQAQIVSDGR* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1801 673 Gene3D Helical hairpin bin 18 60 - -
Pvu5g1801 673 PANTHER ANION EXCHANGE PROTEIN 1 662 IPR003020 GO:0005452|GO:0006820|GO:0016020
Pvu5g1801 673 PANTHER BORON TRANSPORTER 4-RELATED 1 662 - -
Pvu5g1801 673 Pfam HCO3- transporter family 454 544 IPR011531 GO:0006820|GO:0016021
Pvu5g1801 673 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016021
Pvu5g1801 673 Pfam HCO3- transporter family 200 374 IPR011531 GO:0006820|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1801 Pvu-Chr5 39803242 39807869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1801 1 661 Antiporters AT1G74810 70.871 0.0 978
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1801 K24194 - gmx:100811184 1183.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g0982 9 14746745 14752614 Pvu5g1801 5 39803242 39807869 ECH
Pvu5g1801 5 39803242 39807869 Pvu5g1801 5 39803242 39807869 ECH