Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1770 ATGGATGGCATTGAGGATGATGCGAGCTATCACCCTAACCCTTATCGCATCATCAGTCACCAACGAGGTTATGGTTATGGTTATGGTTATGGTTATGGTTATGGTTATCAGAATTCTCCATATTCCCCCCTCCCGGTTAATGCTGAGTATGCCCATCATCATGATGAAGATGAAGAACAAGAGCAGTTAGAAGGAGATGATGAGGTTGATCAAAGTAACAGCCTTCAGCTTGGCCAAAAGGATGGGGATGAAGAAAATGGCATGGATGGGGGTGGTGATGAAAATGGTGATGAGGAAGAGGAGGTAGAGGAGGTAGAGGACAATAAACAGATTACTTATTATGCCACTAAGACTGAAGATGATTTGGAGTGGCACCCAAAGAAGCAAAAGCTGAAGAGTTTGATTTCAACCTATGAACTTGCTCCTCGTGTGCCAGCGCCATCAGCTGCAGCAGCTCCAGTTCCTTCAGCTCCCAAACCATCTTCTGGGGGTAGGAATTCACTCACTGACTGGACTGAGCATGAGACATTTGTTCTTCTTGATGCATGGGGTTATAGGTTTCTTCAACATGGAAGGAAGAGTCTTCGGTGTGAGGAGTGGCAGCAAGTATCGAAAATGGTAGCACGGGTTTCAAAAATTGAAAGGACGGAAACTCAGTGTAGAAACCGCCTTGACACACTGAAGAAAAAATACAAGAAGGAGAAGGCTAAATTTCCAGATAGTGATGGTGGAGATTGCAAATGGGTTTATTTTAAAAAGATGGATGAGCTAATGAATTCTCCTCCACAACAAGTTGGTATCTCTTGTGGTTTGGATTCAGGAGAGTATGTTTTTACGAACCCCGGAGTTTATTTGAATCATGCTAATGGATTGGATGAAATAAGGGATAGTCCTGAGAATGTGGAATCTACCGGTGAAGAAGGTTCGGATGGACTTCAAGCAAAGAAAAGGAAAGGAAGGAGCAGTGGTGAGGCTTCTTCCTTCAGGTTACTTGCCGATTCCATTCAAAAATTCAGTAAGATATATGAAAAGATAGAAAATAGTAAAAGGCAGCAGATGATGGAACTGGAAAAGATGAGAATGGATTTCCATAAGGATTTGGAAACACAGAAGAGGCAGATGTTTGGGAATTTGCAGTTTGAGATTTCAAAACTAGAGCAGATAAATGATGAGAACGATGATTCTGCTGAGAATGGTATGTGA 1203 0.4231 MDGIEDDASYHPNPYRIISHQRGYGYGYGYGYGYGYQNSPYSPLPVNAEYAHHHDEDEEQEQLEGDDEVDQSNSLQLGQKDGDEENGMDGGGDENGDEEEEVEEVEDNKQITYYATKTEDDLEWHPKKQKLKSLISTYELAPRVPAPSAAAAPVPSAPKPSSGGRNSLTDWTEHETFVLLDAWGYRFLQHGRKSLRCEEWQQVSKMVARVSKIERTETQCRNRLDTLKKKYKKEKAKFPDSDGGDCKWVYFKKMDELMNSPPQQVGISCGLDSGEYVFTNPGVYLNHANGLDEIRDSPENVESTGEEGSDGLQAKKRKGRSSGEASSFRLLADSIQKFSKIYEKIENSKRQQMMELEKMRMDFHKDLETQKRQMFGNLQFEISKLEQINDENDDSAENGM* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1770 400 MobiDBLite consensus disorder prediction 87 106 - -
Pvu5g1770 400 MobiDBLite consensus disorder prediction 41 114 - -
Pvu5g1770 400 MobiDBLite consensus disorder prediction 309 323 - -
Pvu5g1770 400 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 47 398 IPR044823 -
Pvu5g1770 400 MobiDBLite consensus disorder prediction 148 168 - -
Pvu5g1770 400 PANTHER OS01G0718900 PROTEIN 47 398 - -
Pvu5g1770 400 Coils Coil 217 237 - -
Pvu5g1770 400 Coils Coil 342 362 - -
Pvu5g1770 400 Gene3D - 171 233 - -
Pvu5g1770 400 Pfam Myb/SANT-like DNA-binding domain 170 257 IPR044822 -
Pvu5g1770 400 MobiDBLite consensus disorder prediction 294 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1770 Pvu-Chr5 39501016 39502792 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1770 316 387 Trihelix Transcription Factor Family AT3G14180 44.444 3.84e-11 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu5g1770 Myb_DNA-bind_4 3.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1770 - - gmx:100779629 541.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1770 5 39501016 39502792 Pvu5g1770 5 39501016 39502792 ECH