Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1768 ATGAGTGTGGTTGGATTTGATTTTGGTAACGAAAGCTGCATTGTTGCGGTTGCAAGACAGAGGGGGATTGATGTGGTGCTCAATGATGAGTCCAAGCGTGAAACACCTGCAATTGTATGCTTTGGTGACAAACAACGGTTTCTTGGGACCGCTGGAGCTGCAACTACTATGATGAATCCAAAGAATTCTATCTCACAGATAAAGAGCTTGATTGGTAGACAATTTTCAGATCCTGAACTGCAGCGAGATCTGAAAACTTACCCTTTTCTTGTCACCGAAGGGCCTGATGGATATCCATTGATTCATGCAAGGTACTTGGGTGATGTTAAAACATTTACACCTACCCAAGTGTTTGGAATGATGTTATCAAACCTTAAAGAAATAGCTGAGAAAAATCTGAATGCTGCTGTTGTTGATTGTTGCATTGGAATTCCACTTTATTTTACTGATCTGCAGAGGAGGGCAGTCTTGGATGCAGCCACTATAGCAGGGTTACACCCTCTTCGACTATTTCATGAAACAACAGCAACTGCATTGGCTTATGGAATTTATAAGACTGATCTTCCTGAAAATGATCAGCTGAATGTTGCCTTTGTTGATGTTGGACATGCCAGCATGCAAGTGTGCATTGCTGGATTTAAAAAGGGTCAGCTTAAAGTGTTGGCCCAGTCATTCGATAGGTCTCTAGGTGGGAGGGACTTTGACGAGGTTTTGTTCCATTATTTTGCTACAAAGTTTAAGGATGAGTACAAGATTGATGTATTGCAAAATGCTAGGGCTTGTATAAGATTGAGGGCTGCTTGTGAGAAGCTGAAGAAGGTGCTTAGTGCTAATCCAGAGGCACCTCTAAACATAGAGTGTTTGATGGATGAGAAGGATGTCAGAAGCTTTATCAAGCGTGATGAGTTTGAGCAACTAAGTCTTCCAATTTTGGAACGAGTGAAGGGACCATTGGAGAAGGCACTTGCGGAGGCAGGTCTTACAGTTGATAATATTCACGTGGTTGAGGTGGTTGGTTCTGGATCCCGTGTACCTGCTATAAACAAAATATTGACAGATTTCTTCAAAAAGGAGCCTAGGCGGACAATGAATGCAAGTGAGTGTGTTGCCAAGGGCTGTGCATTACAGTGCGCAATTCTCAGTCCAACTTTTAAAGTGAGGGAGTTTCAGGTCAATGAAAGCTTTCCTTTCTCAATTTCTCTCTCGTGGAAAGGTTCAAGCTCTGATGCACAGGAAAGTGGACCAGATAGTAAACAAAGTACCCTTGTCTTCCCCAAGGGAAATCCCATACCAAGTTTTAAGGCACTGACAATCTACAGGCAAGGAACGTTTTCTATTGATGTTCAATATGATGATGTGAGTGGTTTGCAAACACCTGCAAAGATCAGCACATACACTATTGGCCCTTTTCAATCAACAAAAGGTGAAAAAGCAAAAATTAAAGTTAGAGTTAGGTTGAATCTGCATGGAATTGTATCTATCGAATCTGCAACTCTCTTGGAAGAGGAAGAAATTGAGGTTCCTGTTTCCAAAGAATCAGCAGGAGAAAATACCAAGATGGAAACTGATGAAGCTGCTGCGGATACTGCCACACCTCCTAGCGCCAATGACAATGATGTTAACATGCAAGATGCTAATGTCAATGCCAATCCATCTGCTGATGTCACTGGGGCTGAAAATGGTACCCCTGAGGCAGGAGATAAACCTGTGCAAATGGATACTGATACCAAGGCTGAGGCTCCAAAGAAGAAGGTGAAGAAAATAAATGTTCCCGTGGTGGAGGTAGTTTATGGAGCAATGTCAGTTGCGGATGTTCAGAAAGCTGTCGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGAGTGATGGAGGAAACAAAAGACAAGAAAAATGCTGTAGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCAAGAGTTTGTCATTGATTCAGAGAGGGAAGCATTCACTACTAAACTTCAGGAGGTGGAAGACTGGCTATATGAAGATGGTGAAGATGAGACTAAAGGTGTATACATTGCCAAACTAGAAGAGCTCAAGAAGCAAGGTGATCCAGTTGAAGAGCGTTACAAAGAATTCACAGAGAGGGGTTCAATAATTGACCAACTCGTCTATTGTATAAATAGTTATAGAGAAGCTGCAATGTCAAGTGATCCCAAATTTGATCACATCGACATCAATGAGAAACAGAAGGTCTTAAATGAATGCTTGGAAGCTGAGAAATGGCTCAGGGAGAAAAAGCTTCAACAGGATACGCTCCCAAAGTATGCCTCCCCTGTACTTTTGTCAGCTGACATAAGAAAGAAAGCTGAAGCTGTTGACAGGTTCTGTAAGCCAATTATGACAAAACCAAAGCCACCTCCGCCAAAGCCAGCCACTCCAGAGGCACCAGCAACCCCACCTCCTCAGGGTGGTGAACAGCAACAGCAGCCGCAACAATCACCATCTCAGGAGAACCCTAATGCCAGCAGTAATGAAAATGCAGGGGACAATGGTAATCCGGCCCCGCCACCACCATCTGCTGAACCAATGGAGACTGAGAAATCAGAGAACACAGGCTCTGCTTAA 2598 0.4299 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFLGTAGAATTMMNPKNSISQIKSLIGRQFSDPELQRDLKTYPFLVTEGPDGYPLIHARYLGDVKTFTPTQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPLYFTDLQRRAVLDAATIAGLHPLRLFHETTATALAYGIYKTDLPENDQLNVAFVDVGHASMQVCIAGFKKGQLKVLAQSFDRSLGGRDFDEVLFHYFATKFKDEYKIDVLQNARACIRLRAACEKLKKVLSANPEAPLNIECLMDEKDVRSFIKRDEFEQLSLPILERVKGPLEKALAEAGLTVDNIHVVEVVGSGSRVPAINKILTDFFKKEPRRTMNASECVAKGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSSSDAQESGPDSKQSTLVFPKGNPIPSFKALTIYRQGTFSIDVQYDDVSGLQTPAKISTYTIGPFQSTKGEKAKIKVRVRLNLHGIVSIESATLLEEEEIEVPVSKESAGENTKMETDEAAADTATPPSANDNDVNMQDANVNANPSADVTGAENGTPEAGDKPVQMDTDTKAEAPKKKVKKINVPVVEVVYGAMSVADVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVIDSEREAFTTKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPVEERYKEFTERGSIIDQLVYCINSYREAAMSSDPKFDHIDINEKQKVLNECLEAEKWLREKKLQQDTLPKYASPVLLSADIRKKAEAVDRFCKPIMTKPKPPPPKPATPEAPATPPPQGGEQQQQPQQSPSQENPNASSNENAGDNGNPAPPPPSAEPMETEKSENTGSA* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1768 865 MobiDBLite consensus disorder prediction 507 580 - -
Pvu5g1768 865 Gene3D - 186 360 - -
Pvu5g1768 865 Gene3D - 600 709 IPR029048 -
Pvu5g1768 865 MobiDBLite consensus disorder prediction 791 811 - -
Pvu5g1768 865 CDD HSPA4_like_NDB 2 381 - -
Pvu5g1768 865 PRINTS 70kDa heat shock protein signature 2 15 - -
Pvu5g1768 865 PRINTS 70kDa heat shock protein signature 30 42 - -
Pvu5g1768 865 PRINTS 70kDa heat shock protein signature 140 160 - -
Pvu5g1768 865 PRINTS 70kDa heat shock protein signature 332 348 - -
Pvu5g1768 865 PRINTS 70kDa heat shock protein signature 363 383 - -
Pvu5g1768 865 PRINTS 70kDa heat shock protein signature 477 493 - -
Pvu5g1768 865 MobiDBLite consensus disorder prediction 529 557 - -
Pvu5g1768 865 MobiDBLite consensus disorder prediction 812 841 - -
Pvu5g1768 865 PANTHER HSC70CB, ISOFORM G-RELATED 1 864 - -
Pvu5g1768 865 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 864 - -
Pvu5g1768 865 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Pvu5g1768 865 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Pvu5g1768 865 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 712 799 IPR029048 -
Pvu5g1768 865 Gene3D - 38 113 - -
Pvu5g1768 865 Gene3D - 5 374 - -
Pvu5g1768 865 Gene3D Actin; Chain A, domain 4 230 313 - -
Pvu5g1768 865 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Pvu5g1768 865 MobiDBLite consensus disorder prediction 788 865 - -
Pvu5g1768 865 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 598 IPR029047 -
Pvu5g1768 865 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 633 IPR029047 -
Pvu5g1768 865 Pfam Hsp70 protein 3 701 IPR013126 GO:0005524|GO:0140662
Pvu5g1768 865 MobiDBLite consensus disorder prediction 507 523 - -
Pvu5g1768 865 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 603 700 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1768 Pvu-Chr5 39489977 39495214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1768 4 406 Calmodulin-binding Proteins AT1G16030 35.961 2.74e-83 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1768 K09489 - gmx:100778196 1439.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1768 5 39489977 39495214 Pvu5g1768 5 39489977 39495214 ECH
Pvu5g1768 5 39489977 39495214 Pvu10g1566 10 42049560 42054779 PCT