Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1766 ATGCCAAAGAAAATTCGAGATTACCTCTTCAGAATCAAAAGCCCTCGTCCTCAAATCCGATTACCCTCCAAGAATTGGATTCTTTCTGGTTGCAAACATCCTCGGACACCGTCCTTTGCCGTGTACAGCGGCGGAAACGAACCTCGTCATCATCACCATCACCACCATGTTCATGTTCGCAACAACAACAACGATGCAGCCACCTTGGCAGACGTTGACCGTTTCCTCTTCGAGAATTTCAAGTCGCTTTACCTCAAAGACGACGAAGAAATTACCTTAAACAGCAAAAGGGTCTTCGATGGTGAATACGAAAACCGCGAAGTGGAAGAAACGACATCGCCGCGTGATCCTCGTGGGTCGCTGGTGGAGGACGTTTTCACAAACACCACGAATACAACGACCAGTGACGAGGTGGGATCGGTCTCAACCGTTTCGACTCTGTACGATGTTTCGTCTTCCGGTTCCTACGAGAAGGCGCGTGCGGATCACGCGCTTCTTCCGGATGATAGCATCGCTCTCTTGTCGCACTCCACCAGCCCTTACGAGGATTTCAGAGGCTCCATGGAAGAAATGGTGAAGAAGCACGAAGGGGTGGTTGATTGGGATTTCATGGAGGAGCTCTTGTTCTGTTACCTTAACCTCAACCGCAAAAAATCGCACAAGTTCATCCTCGGTGCTTTCGTGGATCTCGCCGCCGCCATGCGGCGGAGCAATTCCGAACCGGCTTCCGACAAGCCACGTAGCGTTCGAACCGTTAGGACTGTGACCAAAAACGTAACGTTAGGGTTTTAG 792 0.5076 MPKKIRDYLFRIKSPRPQIRLPSKNWILSGCKHPRTPSFAVYSGGNEPRHHHHHHHVHVRNNNNDAATLADVDRFLFENFKSLYLKDDEEITLNSKRVFDGEYENREVEETTSPRDPRGSLVEDVFTNTTNTTTSDEVGSVSTVSTLYDVSSSGSYEKARADHALLPDDSIALLSHSTSPYEDFRGSMEEMVKKHEGVVDWDFMEELLFCYLNLNRKKSHKFILGAFVDLAAAMRRSNSEPASDKPRSVRTVRTVTKNVTLGF* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1766 263 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 172 234 IPR006458 -
Pvu5g1766 263 ProSiteProfiles OVATE domain profile. 173 233 IPR006458 -
Pvu5g1766 263 PANTHER TRANSCRIPTION REPRESSOR OFP14 3 245 - -
Pvu5g1766 263 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 245 IPR038933 GO:0045892
Pvu5g1766 263 Pfam Transcriptional repressor, ovate 177 233 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1766 Pvu-Chr5 39468605 39469826 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu5g1766 Ovate 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1766 - - vra:106761610 375.555
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1766 5 39468605 39469826 Pvu5g1766 5 39468605 39469826 ECH
Pvu5g1766 5 39468605 39469826 Pvu10g1565 10 42045889 42047173 PCT