Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1732 ATGAACGGTCCTGGGAGACAGGGGCTGAGATCTGGTGCGGCCGGTGTGCACCACCAGCGCCAGTACTCCGATAATTTCCTCGATGGCTCCTCCAACGGCAACAGGTGGCTCCAATCTGCTGGCCTCCAACACCTTCAATCCTCCACCAATCAACTTCCGCCGCTTCAGGACTATAACTTGTACGGCGGTGGCGGCGCAGCGCAGGGAGGAAGAATGTACCGGAATGCGCAGAGGAGCTTTAACGGTGGAACTGAGTATTATGTGGAGCCTTCCACTCCTCCCGGTGGTTACCGCGCTTCGATGCAGAAAAAGAACGGCGATGATTTGTCGGGTGATTTCAGTCCCGGCTTGTTGGATCTGCATTCGTTCGATACCGAGCTTCTTCCTCCTGAGATGCCAGCCTCCAATGCATATGATGCAAACACCCTGTATCAACCTGGTCGAGGGAGAAGTTTTGATGACTCTGAACCTTACATGTTGAGCAAACAAACTGGTAGAGCTCGAGCTCCTGAAAATGAAAACATATTGAAGAGTTTTCCTGCAGAGAAAGAGAAATCTAATCCAGTAGCAAAGATTAAAGTTGTGGTTCGTAAAAGACCAATGAATAAGAAAGAATTAGCAAAAAATGAGGAAGACATTATAGAAACATATTCCAATTCTTTAACAGTGCACGAGACTAAACTGAAGGTGGACTTAACTCGGTATGTAGAAAAGCATGAATTTGTTTTTGATGCTGTTTTGAATGAAGAGGTTACAAATGATGAGGTGTATCGTGAAACAGTAGAGCCTATAGTTCCAATAATCTTTGAACGCACTAAGGCAACATGCTTTGCATATGGACAAACAGGAAGTGGAAAAACTTTCACTATGAAGCCACTGCCACTTAAAGCATCAAGGGACATCCTTAGATTGATGCATCATACTTACAGAAACCAGGGATTTCAATTGTTTGTGAGCTTCTTTGAAATATATGGTGGCAAACTTTTTGATCTTCTTAATGATAGAAAAAAACTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTACAAGAATACCGAGTCTCAGATGTGGAGAACATCAAAGAACTGATTGAGAAAGGAAATTCCACAAGAAGTACAGGCACTACAGGTGCAAATGAGGAATCATCACGATCACATGCAATACTTCAACTTGCTATCAAGAGGTCAGTTGATGGAAATGAATCCAAACCTCCCCGTTTGGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGTAGCGAACGTGGAGCGGATACCACAGATAATGACAAACAGACAAGAATAGAAGGTGCTGAAATCAACAAGAGCTTACTTGCCCTAAAGGAATGCATAAGAGCTCTTGATAATGACCAAGGACACATCCCTTTCAGAGGCAGTAAACTGACTGAAGTTTTGAGGGATTCATTTGTTGGCAACTCCCGCACCGTTATGATTTCATGCATATCACCAAGCACTGGTTCTTGCGAACATACTCTGAATACATTAAGATATGCTGACAGGGTGAAAAGCTTGTCTAAAGGGAACAATACAAAGAAAGATGCTATATCAACAAATTTCAACCTTAAAGAATCAACCACGGTTCCGTTATCTTCCATTACTGGATCAGCCTATGAGGATCGCACAACAGATGGATGGCCAGATGAAAATGAAGGGGATGATTTTAGTCCCCCTGAAGAGTATTACGAGCAGGTGAAACCATCTTCGAAGAAAAATGGAAAGATGGAGTCATATGCTACAACTGATGACAAATTGAAGAAACCCAGTGGTCTGATGAAGTGGAAGGACCTCCCAAAAGTTGAGCCTCAAACCACACGCGCTGAGGATGATTTAAATGCCCTCTTACAGGAAGAAGAGGACCTAGTAAATGCTCACCGGACACAAGTAGAGGAGACCATGAATATTGTTAGAGAGGAGATGAACCTCTTGGTTGAAGCAGATCAACCAGGGAATCAACTGGATGATTATGTAACAAGACTAAATGCCATTCTTTCTCAGAAGGCTGCTGGCATCCTGCAGCTGCAAACCCGTTTAGCCCATTTTCAGAAACGTTTAAAGGAGCACAATGTTTTGGTTTCATCTACTACCGGTTACTGA 2124 0.436 MNGPGRQGLRSGAAGVHHQRQYSDNFLDGSSNGNRWLQSAGLQHLQSSTNQLPPLQDYNLYGGGGAAQGGRMYRNAQRSFNGGTEYYVEPSTPPGGYRASMQKKNGDDLSGDFSPGLLDLHSFDTELLPPEMPASNAYDANTLYQPGRGRSFDDSEPYMLSKQTGRARAPENENILKSFPAEKEKSNPVAKIKVVVRKRPMNKKELAKNEEDIIETYSNSLTVHETKLKVDLTRYVEKHEFVFDAVLNEEVTNDEVYRETVEPIVPIIFERTKATCFAYGQTGSGKTFTMKPLPLKASRDILRLMHHTYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSDVENIKELIEKGNSTRSTGTTGANEESSRSHAILQLAIKRSVDGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSTGSCEHTLNTLRYADRVKSLSKGNNTKKDAISTNFNLKESTTVPLSSITGSAYEDRTTDGWPDENEGDDFSPPEEYYEQVKPSSKKNGKMESYATTDDKLKKPSGLMKWKDLPKVEPQTTRAEDDLNALLQEEEDLVNAHRTQVEETMNIVREEMNLLVEADQPGNQLDDYVTRLNAILSQKAAGILQLQTRLAHFQKRLKEHNVLVSSTTGY* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1732 707 PANTHER KINESIN-RELATED PROTEIN 6 2 704 - -
Pvu5g1732 707 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 514 IPR027417 -
Pvu5g1732 707 PRINTS Kinesin heavy chain signature 271 292 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g1732 707 PRINTS Kinesin heavy chain signature 380 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g1732 707 PRINTS Kinesin heavy chain signature 414 432 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g1732 707 PRINTS Kinesin heavy chain signature 464 485 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g1732 707 PANTHER KINESIN-LIKE PROTEIN KIN-13B 2 704 - -
Pvu5g1732 707 MobiDBLite consensus disorder prediction 369 389 - -
Pvu5g1732 707 MobiDBLite consensus disorder prediction 370 389 - -
Pvu5g1732 707 Pfam Kinesin motor domain 197 513 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g1732 707 Gene3D Kinesin motor domain 168 517 IPR036961 -
Pvu5g1732 707 ProSiteProfiles Kinesin motor domain profile. 191 514 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu5g1732 707 ProSitePatterns Kinesin motor domain signature. 413 424 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu5g1732 707 MobiDBLite consensus disorder prediction 573 591 - -
Pvu5g1732 707 CDD KISc_KIF2_like 191 512 - -
Pvu5g1732 707 MobiDBLite consensus disorder prediction 546 591 - -
Pvu5g1732 707 SMART kinesin_4 189 520 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1732 Pvu-Chr5 39239068 39243970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1732 191 514 Calmodulin-binding Proteins AT5G65930 34.132 1.17e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1732 K10393 - gmx:100799100 1327.77