Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1725 ATGGCATCCCTTTCAGTAGTCCTATGCACTTGTGTCATCATTTTCATGGCTGCCACACCCACTTGTGTTCAAGCTTCCATTCAATTCCATGTTGGTGGTAGCCTCGGTTGGCATGAACCTTCCCCCAACGATTCTGAATTTTATAGCCAATGGGCTGAAAGGAACAGGTTTCAAGTTGGTGATGCTCTTGTTTTCGAGTATGAGAATGACTCAGTTCTTAGCGTGGAGAAATTGGATTACATGAACTGTGACGCAAGTAACCCCATCACAGCTTTTGACAATGGTAAGAGCACTTTTAATCTTGACAGGTCTGGGAATTTCTACTTCATCAGTGGAAACAATGAACACTGCAAGAAAGGGCAAAGATTAGTTGTGGATGTGATTCACCCACATCCTCTCTTTTCATCTCCACCACCCATTTCCCTTCCACCCCAAGGCTTCCCACCAATGGCTCCTCCACCTTCTGATCAAACCTTAGAGGATTCAACAACATCAGCCTCAGTGATGCTTACTGCAGTTTCTATGTCTGTTTTGGTCACATTTGTTAGTGTCATGCTGTTAGCACCATGA 570 0.4439 MASLSVVLCTCVIIFMAATPTCVQASIQFHVGGSLGWHEPSPNDSEFYSQWAERNRFQVGDALVFEYENDSVLSVEKLDYMNCDASNPITAFDNGKSTFNLDRSGNFYFISGNNEHCKKGQRLVVDVIHPHPLFSSPPPISLPPQGFPPMAPPPSDQTLEDSTTSASVMLTAVSMSVLVTFVSVMLLAP* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1725 189 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Pvu5g1725 189 MobiDBLite consensus disorder prediction 139 163 - -
Pvu5g1725 189 Pfam Plastocyanin-like domain 44 121 IPR003245 GO:0009055
Pvu5g1725 189 Gene3D - 27 133 IPR008972 -
Pvu5g1725 189 CDD OsENODL1_like 28 128 IPR041846 -
Pvu5g1725 189 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Pvu5g1725 189 MobiDBLite consensus disorder prediction 139 155 - -
Pvu5g1725 189 PANTHER EARLY NODULIN-LIKE PROTEIN 2 12 178 - -
Pvu5g1725 189 PANTHER BLUE COPPER PROTEIN 12 178 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1725 Pvu-Chr5 39206265 39207099 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1725 3 131 Phytocyanin Superfamily AT1G79800 51.145 2.27e-44 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1725 - - gmx:102664880 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1725 5 39206265 39207099 Pvu5g1725 5 39206265 39207099 ECH