Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu5g1716 | ATGACTCGGCGGTGCTCCCACTGCAGCAACAACGGCCACAACTCCCGGACCTGCCCCTCCTCGCGGGGGGCGGCCGCCGGCGTCAAGCTCTTCGGGGTCAGGCTCACCGATGGATCAATCATAAAGAAGAGCGCCAGTATGGGAAACCTTAACCTCGCCTCCTCCGCACACCACCATTCTTCTCCTTCTTCTTCCAACCTCGCCGCCTCCTCTCCCAATCCAACCTCTCCCTGCTCCGACCTGCTCCATGAGCCTCACGGTTACTTGTCCGACGACCCCGCCCATATCTCCACCCTGGCTAACCGCCGCGGAGAAAGAAAAAAAGGTGTTGCATGGACTGAAGAAGAACATAGGCTGTTCTTAATTGGTCTCCAGAAGCTGGGCAAAGGAGACTGGCGTGGGATAGCACGTAATTTTGTTGTATCAAGGACCCCAACCCAAGTAGCAAGTCATGCCCAGAAGTATTTTATCCGGCAAAGTCATGCTACCAGGAGAAAGAGACGTTCCAGCCTTTTTGACATGGTTCCAGATATGACTTCAGATCCACCTTCAGTGCCAGAAGAACAAGTGCTGCTTCCACCTTCTGAGAAGCCGCAACCTTGTAATGGAAAACTACAGCCTTCACTAAATCTCTCCCTCAAATCAGAATTTGAACCCATGGAAACTACTTCTCAAGAAAACATGGATCAGGCCAATGAAACTATGATGGGATCAAACGGACTGACATCAATGGCTCCTCATGGATTCTTCCCCACTTATTTACCTGTTCCATATCCCATATGGCCATCAACTGCAGCTCCTTTTGAAGAAGTTAAGGGAGGAGAGACATCCCATCATCAGGTCCACAGGCCAATCCCAGTCATTCCCAAGGAACCTGTCAATGTTGACGAACTTGTGGGAATGTCTCATCTCAGCATTGGGGAAACACAGGTACGTGATAGAGAACCTTCCCCGCTTTCCTTAAACTTGTTAGGGGAACCCTCAAGGCAGTCAGCATTCCATGCAAATGCTCCAGTTGGTGGTACGGATTTAAAAACTGGCAAGAACAAAGCAATTCAAGCGGTTTGA | 1068 | 0.5047 | MTRRCSHCSNNGHNSRTCPSSRGAAAGVKLFGVRLTDGSIIKKSASMGNLNLASSAHHHSSPSSSNLAASSPNPTSPCSDLLHEPHGYLSDDPAHISTLANRRGERKKGVAWTEEEHRLFLIGLQKLGKGDWRGIARNFVVSRTPTQVASHAQKYFIRQSHATRRKRRSSLFDMVPDMTSDPPSVPEEQVLLPPSEKPQPCNGKLQPSLNLSLKSEFEPMETTSQENMDQANETMMGSNGLTSMAPHGFFPTYLPVPYPIWPSTAAPFEEVKGGETSHHQVHRPIPVIPKEPVNVDELVGMSHLSIGETQVRDREPSPLSLNLLGEPSRQSAFHANAPVGGTDLKTGKNKAIQAV* | 356 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu5g1716 | 355 | SMART | sant | 108 | 158 | IPR001005 | - | |
Pvu5g1716 | 355 | Gene3D | - | 110 | 161 | - | - | |
Pvu5g1716 | 355 | MobiDBLite | consensus disorder prediction | 332 | 355 | - | - | |
Pvu5g1716 | 355 | MobiDBLite | consensus disorder prediction | 173 | 207 | - | - | |
Pvu5g1716 | 355 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 104 | 160 | IPR017930 | - | |
Pvu5g1716 | 355 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 107 | 159 | IPR006447 | GO:0003677 | |
Pvu5g1716 | 355 | ProSiteProfiles | Myb-like domain profile. | 104 | 156 | IPR001005 | - | |
Pvu5g1716 | 355 | CDD | SANT | 111 | 156 | IPR001005 | - | |
Pvu5g1716 | 355 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 1 | 348 | - | - | |
Pvu5g1716 | 355 | PANTHER | OS01G0187900 PROTEIN | 1 | 348 | - | - | |
Pvu5g1716 | 355 | SUPERFAMILY | Homeodomain-like | 106 | 160 | IPR009057 | - | |
Pvu5g1716 | 355 | MobiDBLite | consensus disorder prediction | 53 | 78 | - | - | |
Pvu5g1716 | 355 | ProSiteProfiles | SANT domain profile. | 112 | 160 | IPR017884 | - | |
Pvu5g1716 | 355 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Pvu5g1716 | 355 | MobiDBLite | consensus disorder prediction | 53 | 84 | - | - | |
Pvu5g1716 | 355 | Pfam | Myb-like DNA-binding domain | 111 | 156 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu5g1716 | Pvu-Chr5 | 39113954 | 39119479 | Dispersed/Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Pvu5g1716 | Myb_DNA-binding | 9.2e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu5g1716 | - | - | gmx:778036 | 597.045 |