Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1700 ATGAATATGAATAGCAGAAAAGGACTTCTTGTACTCTTTGCATTTGTCTTCTTGGCATGGGGTAATGCACAAAATACCCTTGTGCCAGCAATCATAACATTTGGTGACTCAGCCGTGGATGTTGGGAATAATGATTATTTGCCTACCCTTTTCAAGGCAAACTACCCTCCTTATGGAAGGGACTTTGTCAACCATCAACCCACTGGGAGGTTCTGCAATGGGAAACTAGCCACTGATATTACTGCTGAAACACTGGGTTTTAAGAGTTTTGCACCTGCATATCTTAGCCCTCAGGCTTCAGGGAAGAATCTCCTTATTGGAGCAAACTTTGCTTCTGCAGCGTCTGGTTATGATGAAAAGGCTGCTATTTTGAATCATGCGATTCCATTGTCTCAACAGTTAAAATATTACAAGGAATATCAATGCAAGCTGGCCAAGGTTGCTGGCAGTAAAAAAGCATCGCTTATTATTAAGGATGCGCTGTACATATTGAGTGCTGGCAGCAGTGATTTTGTGCAAAACTATTACGTCAATCCTTTGATCAACAAAGCCTTCACTCCTGATCAGTATTCTGCATACCTTGTGGGTGCATTTTCAATCTTTGTTAAGGACTTGTATAAATTGGGAGCTAGGAAAGTTGGAGTGACTTCACTCCCACCTCTAGGTTGCCTACCTGCTGCAAGAACTTTGTTTGGTTTCCACGAGAATGGTTGTGTCTCGAGGATCAACAATGATGCCCAAGGATTTAACAAGAAAATCAAGTCAGCTGCAGCAAATCTCCAAAAGCAACTTCCTGGTCTTAAGATTGTTGTCTTTGATATTTTCAAACCTCTTTATGACCTTGTTCAGTCCCCTTCAAAATATGGTTTTGCCGAGGCAAGAAAAGGTTGCTGTGGTACTGGAATAGTGGAGACAACATCTTTAATGTGCAATCCAAAATCACCAGGAACTTGTTCTAATGCAACCCAATATGTGTTTTGGGATAGCGTCCATCCTTCACAAGCTGCTAACCAAGTTCTAGCCGATGCATTGATTTTACAAGGCATAGCCCTTATCACTTAA 1062 0.4153 MNMNSRKGLLVLFAFVFLAWGNAQNTLVPAIITFGDSAVDVGNNDYLPTLFKANYPPYGRDFVNHQPTGRFCNGKLATDITAETLGFKSFAPAYLSPQASGKNLLIGANFASAASGYDEKAAILNHAIPLSQQLKYYKEYQCKLAKVAGSKKASLIIKDALYILSAGSSDFVQNYYVNPLINKAFTPDQYSAYLVGAFSIFVKDLYKLGARKVGVTSLPPLGCLPAARTLFGFHENGCVSRINNDAQGFNKKIKSAAANLQKQLPGLKIVVFDIFKPLYDLVQSPSKYGFAEARKGCCGTGIVETTSLMCNPKSPGTCSNATQYVFWDSVHPSQAANQVLADALILQGIALIT* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1700 353 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 2 352 - -
Pvu5g1700 353 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Pvu5g1700 353 SUPERFAMILY SGNH hydrolase 31 344 - -
Pvu5g1700 353 Pfam GDSL-like Lipase/Acylhydrolase 31 343 IPR001087 GO:0016788
Pvu5g1700 353 Gene3D SGNH hydrolase 21 348 IPR036514 -
Pvu5g1700 353 PANTHER GDSL ESTERASE/LIPASE EXL3 2 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1700 Pvu-Chr5 39009110 39010838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1700 9 345 Pollen Coat Proteome AT1G75910 35.000 1.43e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1700 - - gmx:100795716 671.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1700 5 39009110 39010838 Pvu5g1700 5 39009110 39010838 ECH
Pvu5g1700 5 39009110 39010838 Pvu10g1493 10 41526634 41528995 PCT