Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1696 TTGGGTCAAAATCCACATATATGTGAACATGGTGAATGCATAGACCACAGAAAGCACAGAAATAGCATTGTTATACCCTTGGTAGCATCAATCTGTGGGGGTTTGATCCTTCTGGTGACCGTGACAGCTATATTGTGGATCCTTAGGAGGAGGAGAAAATCAAAAGCTTCGATGGTAGAAAAGGATCAAAGTGAGATATCCGAGCAGCACACAAAACAAGAGGGTTCATTACAGCAGTCTAAAAAACAAATATGTTCACACTCCGACATCTGTAAAATTACCAACAATTTCAATACAATTGTTGGTAAAGGAGGATTTGGAACAGTTTATCTGGGCTATATTTATGACATTCCAGTTGCTGTCAAAATTCTTTCCCCTTCATCATTCCGTGGTTATGAACAATTTCAAGCAGAGGTTACACTTCTACTGAGAGTTCATCATAAAAATCTGACTTCCCTTATTGGTTATTGTGACGAAGGAAGCAATAAGAGTCTCATATATGAGTACATGGCCAATGGAAACTTACTGGAACATCTCTCTGGTAAACACAGTAAATCAAAATTCTTGAGCTGGGAAGACAGACTACGTATAGCAGTGGACGCAGCCTTGGGATTGGAGTATCTGCAAAATGGTTGCAAGCCACCTATAATACACCGAGACGTAAAATCTTCGAACATCTTGTTGAATGAACACTTCCAAGCGAAGTTATCTGATTTTGGTCTATCCAAAATTATCCCAGATGATGGGGGATCACATTTGTCAACTGTTGTTGCTGGAACTCCTGGTTACCTGGACCCTGACTATTACACAAACAATAGATTAACAGAGAAAAGTGATGTTTATAGCTTTGGAGTGGTTCTTCTGGAAATAATCACAGGCCAGCAAGTAATAGCAAGGAACGAAGAAAGGTGTCACATAATTGAATGGGTTAGATCCCTGGTTGCAATAGGGGATATCAAGGCCATTGTTGACTCAAGGTTAGAAGGAGATTTTGACATTAACTCAGCCTGGAAAGCCGTGGAAATAGCAATGGCTTGTGTTTCTCTACGTCCCAACCAAAGACCAATTATGAGTGTGATAGTGTTTGAACTAAAGGAGACCTTAGCAACTGAATTAGCTCGAACAAAACCTAACAGTAGTGCAGAGTCAATTGAACCGGTCAATCTGGATTTCAGCGCCCAACTCATACCTCTCGCTAGGTAA 1203 0.4048 LGQNPHICEHGECIDHRKHRNSIVIPLVASICGGLILLVTVTAILWILRRRRKSKASMVEKDQSEISEQHTKQEGSLQQSKKQICSHSDICKITNNFNTIVGKGGFGTVYLGYIYDIPVAVKILSPSSFRGYEQFQAEVTLLLRVHHKNLTSLIGYCDEGSNKSLIYEYMANGNLLEHLSGKHSKSKFLSWEDRLRIAVDAALGLEYLQNGCKPPIIHRDVKSSNILLNEHFQAKLSDFGLSKIIPDDGGSHLSTVVAGTPGYLDPDYYTNNRLTEKSDVYSFGVVLLEIITGQQVIARNEERCHIIEWVRSLVAIGDIKAIVDSRLEGDFDINSAWKAVEIAMACVSLRPNQRPIMSVIVFELKETLATELARTKPNSSAESIEPVNLDFSAQLIPLAR* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1696 400 SMART serkin_6 95 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1696 400 ProSitePatterns Protein kinases ATP-binding region signature. 101 122 IPR017441 GO:0005524
Pvu5g1696 400 Gene3D Transferase(Phosphotransferase) domain 1 170 385 - -
Pvu5g1696 400 CDD STKc_IRAK 101 366 - -
Pvu5g1696 400 Pfam Protein tyrosine and serine/threonine kinase 98 361 IPR001245 GO:0004672|GO:0006468
Pvu5g1696 400 SUPERFAMILY Protein kinase-like (PK-like) 79 362 IPR011009 -
Pvu5g1696 400 ProSiteProfiles Protein kinase domain profile. 95 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1696 400 MobiDBLite consensus disorder prediction 58 78 - -
Pvu5g1696 400 PANTHER OS07G0107800 PROTEIN-RELATED 3 388 - -
Pvu5g1696 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 216 228 IPR008271 GO:0004672|GO:0006468
Pvu5g1696 400 Gene3D Phosphorylase Kinase; domain 1 66 169 - -
Pvu5g1696 400 PANTHER PUTATIVE-RELATED 3 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1696 Pvu-Chr5 38991065 38992782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1696 4 400 Receptor kinase-like Gene Family AT1G51850 50.367 1.67e-130 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1696 PK_Tyr_Ser-Thr 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1696 - - vun:114185309 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1696 5 38991065 38992782 Pvu5g1696 5 38991065 38992782 ECH