Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1691 CCGTCAACCATCATCATCAGCGGGAAAGAAATTAAAATTTCCCTGGAGAGGACCGAAAATTCAAACCTACCTCCCATCATCAATGCCATTGAAATTTACAGATTAATAGAATTCCAGCAATCAGATACGTACCAAGGAGATGTTGATGCGATTACAAGCATGAAGTCAGTTTATGGAGTGAAAAGAGATTGGGAAGGTGATCCATGCGCCCCTGCAGCCTACTTGTGGGATGGTCTCAATTGTTCTTATCACGGAATTGAGTCTCCAAGAATCACAACTCTGAATTTATCTTCAAGTGGATTGTCAGGAAACGTAGACCCTACAATCTCAAATCTCAGCATGTTGGAGAAGTTGGATTTATCTAACAATAACTTAACTGGTGAAGTTCCTGATTTTCTGATTCATTTGCAACGCTTGAAGATCTTAAACTTGGAGAAGAATGACCTCTCCGGTTCAATTCCCTCTGCACTTGTTGAAAGATCTGAGGAAGGTTCTCTCTCGCTAAGTGTGGGTCAAAATCCATATCTATGTGAATCTGGTCAATGCAACGAGACGAAAAAGAAAAACACTGTTACACCCATAGTAGCATCAATTAGTGGGGTTTTAATTCTTCTAATAGCCGTTGCAATACTGTGGATCTTCTTTAAAAGGAAAAAATCAAAAGATTCGGTGACAGTAAATCATCAGAATAAGATTTCACAGCAATCCACAGAAAAGGATGATTCGCTCCTGCAATGCAAAAGTCAAATGTATTCATACAATGATGTCCTTCAAATCACTAACAATTTCAATAGAATTATTGGTAAAGGAGGATTTGGAACAGTTTACCTGGGCTTTATCGATGACACTCCAGTTGCAGTGAAAATGCTTTCCCCATTAGCAGTTCATGGTTATCAGCAATTTCAGGCAGAGGTTAAAGTTCTAATCAGAGTTCATCACAAAAATTTGACATCCCTTATTGGTTACTGTAACGGAGGAACCAACAAGGGTCTCATATATGAGAGTAAATACAATGAATCACCATTCTTGAGCTGGAAGGAAAGACTTCGTGTAGCAGTGGATGCAGCCCAAGGGTTGGAATATCTGCAAAATGGTTGCAAGCCTCCTATATTCCACAGAGATGTAAAATCTTCAAACATCTTGTTGGATGAACACTTCCAAGCAAAATTATCTGATTTCGGTCTATCCAAAGTTGTCCCAGATGATGGGAGATCTCATGTGTCAACTATTGTTGCTGGTAATTTTGGTTATCTGGACCCTCACTACCACTCTTCCAATCGATTGACACAGAAAAGTGATGTTTGTAGTTTTGGAGTTGTTCTTTTGGAAATAATCACAAATCAATCGGTAACAGGAAGGAATGAAGAAAATGGTCACATAAGTGAACGAGTTAGTTCCATGATACCAACGGGGGATATCAGGGCCATAGTTGACTCAAGGTTAGAAGGAAATTTTGACATTAACTCCGCATGGAAAGCCCTAGAAATAGCAATGACTTGTGTTTCTCCAAATCCCAATGAAAGGCCAATGATGAGTGTGGTGGTGATTGAACTACAGGAGACTTTAGCGACTGAATTAGCTAGAACAGAGCATAATAATGGTGCTGATCCTTGGTATTCAGTTGCAGCGTGGAGTGAATCCGAATTAATGCCCTTGGCTAGGTAA 1665 0.3976 PSTIIISGKEIKISLERTENSNLPPIINAIEIYRLIEFQQSDTYQGDVDAITSMKSVYGVKRDWEGDPCAPAAYLWDGLNCSYHGIESPRITTLNLSSSGLSGNVDPTISNLSMLEKLDLSNNNLTGEVPDFLIHLQRLKILNLEKNDLSGSIPSALVERSEEGSLSLSVGQNPYLCESGQCNETKKKNTVTPIVASISGVLILLIAVAILWIFFKRKKSKDSVTVNHQNKISQQSTEKDDSLLQCKSQMYSYNDVLQITNNFNRIIGKGGFGTVYLGFIDDTPVAVKMLSPLAVHGYQQFQAEVKVLIRVHHKNLTSLIGYCNGGTNKGLIYESKYNESPFLSWKERLRVAVDAAQGLEYLQNGCKPPIFHRDVKSSNILLDEHFQAKLSDFGLSKVVPDDGRSHVSTIVAGNFGYLDPHYHSSNRLTQKSDVCSFGVVLLEIITNQSVTGRNEENGHISERVSSMIPTGDIRAIVDSRLEGNFDINSAWKALEIAMTCVSPNPNERPMMSVVVIELQETLATELARTEHNNGADPWYSVAAWSESELMPLAR* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1691 554 Pfam Leucine rich repeat 89 149 IPR001611 GO:0005515
Pvu5g1691 554 Gene3D - 182 222 - -
Pvu5g1691 554 ProSiteProfiles Protein kinase domain profile. 261 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1691 554 Pfam Protein tyrosine and serine/threonine kinase 263 516 IPR001245 GO:0004672|GO:0006468
Pvu5g1691 554 Gene3D Phosphorylase Kinase; domain 1 243 331 - -
Pvu5g1691 554 Gene3D Transferase(Phosphotransferase) domain 1 332 538 - -
Pvu5g1691 554 SUPERFAMILY Protein kinase-like (PK-like) 244 517 IPR011009 -
Pvu5g1691 554 SUPERFAMILY L domain-like 48 157 - -
Pvu5g1691 554 ProSitePatterns Protein kinases ATP-binding region signature. 267 288 IPR017441 GO:0005524
Pvu5g1691 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 370 382 IPR008271 GO:0004672|GO:0006468
Pvu5g1691 554 PANTHER OS07G0107800 PROTEIN-RELATED 5 535 - -
Pvu5g1691 554 SMART serkin_6 261 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1691 554 PANTHER PUTATIVE-RELATED 5 535 - -
Pvu5g1691 554 Gene3D Ribonuclease Inhibitor 48 168 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1691 Pvu-Chr5 38946219 38950174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1691 6 554 Receptor kinase-like Gene Family AT2G19210 49.383 1.44e-180 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1691 PK_Tyr_Ser-Thr 7.9e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1691 - - pvu:PHAVU_005G1642001 1077.77