Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1688 ATGGTGCTCGTATATCTGTCATCCTACAGAGTGTTGGTGACTTTCTTCATTGCTTTTCTATGTGCTTTACTTATTCAAGCTCAGAACCAAGCAGGTTTCATCAGCATAGACTGCGGTGCTCGTGCCGATGAGAAATATACTGAAGAGTCCACAGGCATAGATTACATATCAGATGCAAGTTTGATAACTGGTGGTGTGAGTAAGTCAATAGCATCTGATCTCAAAGGAATGTATCAGCAACAGATGTGGACTGTGAGAAGCTTCCCTGAAGGAAGAAGGAACTGCTACAAAATAAAAATCACAAGACACTCTAAGTATCTTATCCGGACTCTTTATTTGTACGGAAATTATGATGGGCTGAATAAGACACCACAATTTGATCTTCTTCTGGGACCTAACTTCTGGCACACAGTGACTATACACAATGCATCCATTGTCCAATACAAAGAGATCATACATGTACCTTCACAAGATTATGTACAAATCTGTATGGTTGACACCGGCCATGGAACACCATTTATATCAGCTATAGAATTGAGAAATTTGACTGATAATCTTTATGTCACTCAATCTGGATCGTTGGAAACTCAGGAGCGGTGGGATTTAGGTTCAAACATCGTCTACAGGTACAAGGACGATGTTTATGATCGTTACTGGTTTTTAGGCAACACCAATGATTCGACACAATTAAGTGTTTCGATTTCTGATAAGAATTTACTCTACCAGTCCGAATACTACCCGCCAGCTATTGTGATGAGCACTGCAGTTACACTTGTAAATGCTAGTGCTCCGATGGTAATAAGCTGGGAGCCAAAACATGAAACTGATGAATTCTATGTTTACATGCACTTCATGGAGGTTCAAGTGTTAACCACCAATCAGACAAGACAATTCAACATCACGCTGAACGGTCAATCATGGTATCCAAATTGTTCTCCGCAGTACATGAGCGTCCAAACTATATATAGCAAGTCAGGCATCAGCGGGAAAGAAATTAAAATTTCTCTGGAGAGGACCGAAAATTCAACCCTACCTCCCATCATCAATGCCATTGAAATTTACAAAGTAAAACAATTCCAGAAATCTGATACATTCCAAGGAGACGTTGATGCGATTACAAGCATCAAGTCAGTTTATGGAGTGAAAAGAGATTGGGAAGATGATCCATGCGCCCTGCAGAATTTATCTTCAAGTGGATTGTCAGGAAACATAGACACTTCAATCTCAAATCTCATCATGTTGGAGAAGTTGGATTTATCTAACAATAACTTAAGTGGTGAAGTTCCTGATTTTCTGATTCATTTGCAACACTTGAAGATCTTAAACTTGGAGAAGAATGACCTCTCCGGTTCAATTCCCTCTTCACTTATTGAAAAATCACACAAAGGTTCTCTCTCACTAAGTGTGGGTCAAAATCCAAATCTATGTGAATCTGGTCAATGCAACGAGACGAAAAAGAAAAACATTGTTACACCCATAGTAGTATCCATTTGTGGGGTTTTAATTCTTCTAATAGCCGTTGCAATACTGTGGATCTGTAAAAGGAAAAAATCAAAAGATTCGGTGGCAGTAAATCATCAGAATAAGATTTCACAGCAATCCACAGAAAAGGATGATTCGTTCCTGCAAGGCAAAAGTCAAATGTATTCATACAATGATGTCCTTCAAATCACTAACAATTTCAATAAAATTATCGGTAAAGGAGGATTTGGAACAGTTTACCTGGGCTTTATCGATGAGATTCCAGTTGCAGTGAAAATGCTTTCCCCATCAGCAGTTCATGGTTATCAACAATTTCAGGGAGAGGTTAAAGTTCTAATCAGAGTTCATCACAAAAATTTGACATCCCTTATTGGTTACTGTAACGAAGGAACCAACAAGGCTCTCATATATGAGTACATGGCTAAAGGGAACTTACGAGAACATCTCTCAGGTAAATACAACGAATCACCATTCTTGAGCTGGAAGGAAAGACTTCGTGTAGCAGTGGATGCAGCCCTAGGGTTGGAATATCTGCAAAATGGTTGCAAGCCTCCTATAATCCACAGAGATGTGTCAACTATTGTTGCTGGTACTTTTGGTTATCTGGACCCTCACTACCACTCTTCCAATAGATTAACACAGAAAGGTGATGTTTATAGCTTTGGAGTTGTTCTCTTGGAAATAATCACAAATCAATCAGTAATGGCAGGGAATGAAGAAAATGGTCACATAAGTGAACGAGTTAGCTCCATGATATCAACAGGGGATATGAGGGGCATAGTTGACTCAAGGTTAGAAGGAAATTTTGACATTAACTCCGCATGGAAAGCCCTAGAAATAGCAATGGCTTGTGTTTCTCCAAATCCCAACGAAAGGCCAATGATGAGTGTGGTGGTGATTGAACTACAAGAGAGTTTGGCCACGGAATTAGCTAGAACAGAGCATAACAATGGTGGTGATCCTAGGTACTCAGTTGCGGAGGGGAGCGAGGATTTAGACACCGAATTCATGCCCTTTGCTAGGTAA 2508 0.3983 MVLVYLSSYRVLVTFFIAFLCALLIQAQNQAGFISIDCGARADEKYTEESTGIDYISDASLITGGVSKSIASDLKGMYQQQMWTVRSFPEGRRNCYKIKITRHSKYLIRTLYLYGNYDGLNKTPQFDLLLGPNFWHTVTIHNASIVQYKEIIHVPSQDYVQICMVDTGHGTPFISAIELRNLTDNLYVTQSGSLETQERWDLGSNIVYRYKDDVYDRYWFLGNTNDSTQLSVSISDKNLLYQSEYYPPAIVMSTAVTLVNASAPMVISWEPKHETDEFYVYMHFMEVQVLTTNQTRQFNITLNGQSWYPNCSPQYMSVQTIYSKSGISGKEIKISLERTENSTLPPIINAIEIYKVKQFQKSDTFQGDVDAITSIKSVYGVKRDWEDDPCALQNLSSSGLSGNIDTSISNLIMLEKLDLSNNNLSGEVPDFLIHLQHLKILNLEKNDLSGSIPSSLIEKSHKGSLSLSVGQNPNLCESGQCNETKKKNIVTPIVVSICGVLILLIAVAILWICKRKKSKDSVAVNHQNKISQQSTEKDDSFLQGKSQMYSYNDVLQITNNFNKIIGKGGFGTVYLGFIDEIPVAVKMLSPSAVHGYQQFQGEVKVLIRVHHKNLTSLIGYCNEGTNKALIYEYMAKGNLREHLSGKYNESPFLSWKERLRVAVDAALGLEYLQNGCKPPIIHRDVSTIVAGTFGYLDPHYHSSNRLTQKGDVYSFGVVLLEIITNQSVMAGNEENGHISERVSSMISTGDMRGIVDSRLEGNFDINSAWKALEIAMACVSPNPNERPMMSVVVIELQESLATELARTEHNNGGDPRYSVAEGSEDLDTEFMPFAR* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1688 835 Gene3D Transferase(Phosphotransferase) domain 1 687 814 - -
Pvu5g1688 835 SUPERFAMILY L domain-like 394 458 - -
Pvu5g1688 835 Gene3D Phosphorylase Kinase; domain 1 530 633 - -
Pvu5g1688 835 ProSitePatterns Protein kinases ATP-binding region signature. 565 586 IPR017441 GO:0005524
Pvu5g1688 835 ProSiteProfiles Protein kinase domain profile. 559 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1688 835 Gene3D Transferase(Phosphotransferase) domain 1 634 686 - -
Pvu5g1688 835 SUPERFAMILY Protein kinase-like (PK-like) 542 794 IPR011009 -
Pvu5g1688 835 PANTHER PUTATIVE-RELATED 685 834 - -
Pvu5g1688 835 PANTHER PUTATIVE-RELATED 19 687 - -
Pvu5g1688 835 Pfam Malectin-like domain 36 356 IPR024788 -
Pvu5g1688 835 Gene3D Ribonuclease Inhibitor 356 469 IPR032675 -
Pvu5g1688 835 Pfam Protein tyrosine and serine/threonine kinase 561 686 IPR001245 GO:0004672|GO:0006468
Pvu5g1688 835 PANTHER OS07G0107800 PROTEIN-RELATED 685 834 - -
Pvu5g1688 835 PANTHER OS07G0107800 PROTEIN-RELATED 19 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1688 Pvu-Chr5 38905280 38909410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1688 1 835 Receptor kinase-like Gene Family AT2G19210 44.199 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1688 Malectin_like 1.3e-111 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1688 - - gmx:100785345 1077.77