Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1687 ATGTGGATGACTTTCTACGTTGCCTTTTTAGCTGTTCTACTTATTCCAGCTCATGCTCAACCAGGATTCATCAGCATAGATTGCGGAGCTGAAGCAGGTTTCAACTATACTGAACCATACATAAATTATGTCTCGGATGAAAATTTCATAAATACTGGTGTGAGAGAGACAATAGCAACATACACTCAACAACAATATATGTGGAGGCTGAGAAGCTTCCCGGAAGGAAAGAGGAACTGCTACAAAATAAGCATCACAAGAGGCTCTAAGTATCTCATCCGCACTACTTTTCTGTACGGAAATTATGATGGCCGAAATATGTTACCAATGTTTGATCTTCTTCTGGGAACTAACCTGTGGGATACAGTCACTATAAAAAATGCATTCATGGACCAATCCAATGAGATTATACATGTACCTTCACTGGATTTCATACAAATCTGTCTGGTTAACACAGGAAATGGTACACCATTTATAACAGCCATTGAATTGAGGACTTTGAAGAATGATACATACGTCACTGAATCGATATCACTGGAACTTTATAATCGATTCGATTTGGGTTCTAACAGGGGTTACAGGTACCGGCCTGATGTTTATGATCGTTTCTGGTATGTCTGGGACAAAAAAGATTGGACTAAGTTAAGTGCTTCCATTCCAGATGATTCTTTGAAAGAGAATGATTACAAACCGGGAGCAACCATCATGAGCACCGCAGTTACACCAGCAAATGACAGTGCTCCGTTAGTAATAAGCTGGGAGGCAGAAGATGAAACTGAGGAATTCTATATGTACATGCACTTCACGGAGATCCAGGTGTTAACCACGAATCAGACAAGACAATTCAACATCAGGAGGAACGGTGAATCAGGGTGGTGGTTTCAAAATTTCTCTCCACTGTACCACAATGTCACTACTCTATATACCCCGTCAGCCATCAGCGGCAAAGTAATTACATATTCACTGGAGAGGACCAAAAATTCTACCCTGCCTCCCATCATCAATGCCATTGAAATTTACAAAGTAAAACAATTCCATCAATCTAATACATTCCAAGGAGATGTCGATGCGATTACAAGCATCAAGTCAGTTTATGGGCTGACAAGAGATTGGGAAGGTGATCCATGCGCCCCTGCAGCCTACTTGTGGGATGGTTTGAACTGTACCTATGGCGACAATGAGGTCCCAAGAATCACATCTTTGAATTTAGGATCAAGTGGATTGTCAGGAAAGATAAACCCTTCAATCTCAAAACTCACCATGTTGGAGAATCTGGATTTATCTAACAATAACTTAAGTGGTGAAATTCCTGATTTTCTGATTCAGTTGCAACACTTGAAGATCTTAAACTTGGAGAAGAATGACCTCTCCGGTTCAATTCCCTCTTCACTTATTGCAAAATCACACAAAGGTTCTCTCTCACTAAGTGTGGGTCAAAATCCAAATCTATGTGAATCTAGTCAATGCAACGAGACGAAAAAGAAAAACATTGTTACACCCATAGTAGTATCAATTAGTGGGGTTTTAATTCTTCTAATAGCCGTTGGAATACTGTGGATCTGTAAAAGAAAAAAATCAAAAGATTCGGTGGCGGTAAATCATCAGAATAAGATTTCACAGCTATCCACAGAAAAGGATGATTCGTTCCTGCAACACAAAAGTCAAATGTATTCATACATTGATGTCCTTCAAATCACTAACAATTTCAATAGAATTATTGGTAAAGGAGGATTTGGAACAGTTTATCTGGGCTTTATCGATGAGACTCCAGTTGCAGTGAAAATGCTTTCCCCATCAGCAGTTCATGGTTATCAACAATTTCAGGCAGAGGTTAAACTTCTAATCAGAGTTCATCACAAAAATTTGACATCCCTTATTGGTTACTGTAACGAAGGAACCAACAAGGGTCTCATATATGAGTACATGGCTAAAGGGAACTTACGAGAACATCTCTCAGGTAAATACAACGAATCACCATTCTTGAGCTGGAAGGAAAGACTTCGTGTAGCAGTGGATGCAGCCCTAGGGTTGGAATATCTGCAAAATGGTTGCAAGCCTCCTATAATCCACAGAGATGTAAAATCTGCAAACATCTTGTTGGATGAACACTTCCAAGCAAAATTATCTGATTTCGGTCTATCCAAAGTTGTCGCAGATGATGGGGCATCTCATGTGTCAACTATTGTCGCTGGTACTTTTGGTTATCTGGACCCTTACTACCACTCTTCCAATCGATTGACACAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTAGAAATAATCACAAATGAATCAGTAACGGGAAGGAATGAAGAAAGTGTTCACATAAGTGAACGAGTTAGCTCCAAAATACCAACAGGGGATATCAGGGCCATAGTTGACTCAAGGTTAGAAGGAAATTTTGACATTAACTCCGCATGGAAAGCCCTAGAAATAGCAATGGCTTGTGTTTCTCCAAATCCAAAGGAAAGGCCAATGATGAGTGTGGTGGTGATTGAACTACAAGAGAGTCTGGCCACGGAATTAGCAAGAACAGAGCATAATAATGGTGGTGATCCTATGTATTCAGTTGCCGCAATGAGCGAGGATTTAGAATCCGAATTCATGTCCTTGGCTAGATGCAGTTGA 2634 0.3998 MWMTFYVAFLAVLLIPAHAQPGFISIDCGAEAGFNYTEPYINYVSDENFINTGVRETIATYTQQQYMWRLRSFPEGKRNCYKISITRGSKYLIRTTFLYGNYDGRNMLPMFDLLLGTNLWDTVTIKNAFMDQSNEIIHVPSLDFIQICLVNTGNGTPFITAIELRTLKNDTYVTESISLELYNRFDLGSNRGYRYRPDVYDRFWYVWDKKDWTKLSASIPDDSLKENDYKPGATIMSTAVTPANDSAPLVISWEAEDETEEFYMYMHFTEIQVLTTNQTRQFNIRRNGESGWWFQNFSPLYHNVTTLYTPSAISGKVITYSLERTKNSTLPPIINAIEIYKVKQFHQSNTFQGDVDAITSIKSVYGLTRDWEGDPCAPAAYLWDGLNCTYGDNEVPRITSLNLGSSGLSGKINPSISKLTMLENLDLSNNNLSGEIPDFLIQLQHLKILNLEKNDLSGSIPSSLIAKSHKGSLSLSVGQNPNLCESSQCNETKKKNIVTPIVVSISGVLILLIAVGILWICKRKKSKDSVAVNHQNKISQLSTEKDDSFLQHKSQMYSYIDVLQITNNFNRIIGKGGFGTVYLGFIDETPVAVKMLSPSAVHGYQQFQAEVKLLIRVHHKNLTSLIGYCNEGTNKGLIYEYMAKGNLREHLSGKYNESPFLSWKERLRVAVDAALGLEYLQNGCKPPIIHRDVKSANILLDEHFQAKLSDFGLSKVVADDGASHVSTIVAGTFGYLDPYYHSSNRLTQKSDVYSFGVVLLEIITNESVTGRNEESVHISERVSSKIPTGDIRAIVDSRLEGNFDINSAWKALEIAMACVSPNPKERPMMSVVVIELQESLATELARTEHNNGGDPMYSVAAMSEDLESEFMSLARCS* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1687 877 PANTHER PUTATIVE-RELATED 10 853 - -
Pvu5g1687 877 SUPERFAMILY L domain-like 384 465 - -
Pvu5g1687 877 SUPERFAMILY Protein kinase-like (PK-like) 548 834 IPR011009 -
Pvu5g1687 877 Gene3D Phosphorylase Kinase; domain 1 539 641 - -
Pvu5g1687 877 PANTHER OS07G0107800 PROTEIN-RELATED 10 853 - -
Pvu5g1687 877 ProSiteProfiles Protein kinase domain profile. 567 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1687 877 Pfam Protein tyrosine and serine/threonine kinase 569 834 IPR001245 GO:0004672|GO:0006468
Pvu5g1687 877 SMART serkin_6 567 840 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1687 877 Gene3D Ribonuclease Inhibitor 355 477 IPR032675 -
Pvu5g1687 877 CDD STKc_IRAK 573 838 - -
Pvu5g1687 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 688 700 IPR008271 GO:0004672|GO:0006468
Pvu5g1687 877 Pfam Malectin-like domain 26 342 IPR024788 -
Pvu5g1687 877 ProSitePatterns Protein kinases ATP-binding region signature. 573 594 IPR017441 GO:0005524
Pvu5g1687 877 Gene3D Transferase(Phosphotransferase) domain 1 642 857 - -
Pvu5g1687 877 ProSiteProfiles Leucine-rich repeat profile. 421 443 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1687 Pvu-Chr5 38893939 38899157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1687 9 846 Receptor kinase-like Gene Family AT1G51800 48.485 0.0 793
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1687 Malectin_like 8.5e-106 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1687 - - gmx:100170722 1158.67