Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1684 ATGGGAATGTCATCGATTTTCGTAGGAGCTCTAGTTCTTGTCATTCTGATTCAAGCTAAGGGCCAACCAGGATTCATCAGCATAGATTGCGGAGCCGAAGCAGGTGTGAACTATACCGAGCCATCATTGGACATAAATTATGTTTCGGATGCAAATTTCATAAATACTGGTGTGAGAGGGATAATAACATCTGAAGAGACCAGCACACACACTCAACGACAGCTGTGGAGGCTGAGAAGCTTCCCCGAAGGAAAAAGGAACTGCTACAAAATAAGCGTCACAAGAGGCTCTAAGTATCTCGTCCGCACTGTTTTTCTGTATGGAAATTATGATGGCCGAAATATGCTACCACAGTTTGATCTACTTCTGGGAGCTAACCTGTGGGATACAGTCACTATAAAAAATGCATCCATTGACCAATCCATGGAAATCATACATGTATCTTCACTGGATTTCATACAAATCTGTCTGGTTTACACAGGCAATGGTACACCATTTATAACAGCCATAGAATTGAGGACTTTGAATAATGATACATACGTCACTCCAGGATCGCTGGAACGTTACATGCGGTGCGATTTGGGTTCTAACACAGTTTACAGGTACGGGTATGATGATTATGATCGTATCTGGTCTACCTGTGACTTCAAGGAAAATTGGACACAGCTAAGTGTTTCGATTTCAGATGATTCTTTTGTTGAGAACGAGTACAAACCGGAAGCAACCATCATGAGCACCGCAGTTACACCAGCAAATGATAATGCGCCGTTGGTAATAAGGTGGGAGCCAGAACATGAAACTGATGAATTCTCTGTGTACATGCACTTCACGGAGCTTCAAGTGTTAACCACCAATCAGACAAGACAATTCAACATGAGCGGTGCATTATTTTTGCAAAATTATTCTCCGCCGTACATGCGCGTCTTCACGATATATAGCGTGTCAGCCCTCAGCGGAAAAGAAATTAAATTTTCCCTGGAGAGGACCGAAAATTCAACCCTACCTCCCATCATGAATGCCATTGAAATTTACAAAGTAAAACAATTTCATCAATCTGATACATTCCAAGGAGATGTTGATGCGATTACAAGCATAAAGTCAGTTTATGGAGTGAAAAGAGATTGGGAAGGTGATCCATGCGCCCCTGCAGCCTACTTGTGGGATGGTCTCAATTGTTCTTATCAAGGAATTGAGTCTCCAAGAATCACAACTTTGAATTTATCTTCAAGTGGATTGCATGGAAAGATTGCCCCTTCAATTTCAAATCTCACCATGCTGGAGATATTGGATTTATCAAACAATAGCTTAAACGGTGAAATTCCTGATTTTCTGTCACAACTGCAACACTTAAAGATCTTAAACTTGGAGAAGAATAACCTCTCTGGTTTAATTCCACCAGCACTTAATAAAGATTCCCTCTTACTACGTGTCGACCAAAATCCATATTTATGTGAAGCTGATCAAAGCAACAAGAAGAAAAAAAAGAAACACAATAGCATTGCTACACCCATAGTAGCATCAGTTGGCGGGGTTTTGATCCTTTTGGTAGTAGTGGCAGCCATGTTGTGGACCGCTAAAAGAAGAAAAGCCAAAGCTTTGATGTTAGAAAAGGATCAAAGTGCCATATCACCGCAATACACTGAACAAAATGATTCATCACTTCGATTTCAAAAGCAAATATATTCATACTCTGATATCGTTAAAATCACCAACAATTTCACTACAATTGTTGGTAAAGGAGGATTTGGAACAGTTTATCTGGGCTATATAGAAGACACTCCAGTTGCAGTGAAAATGCTTTCCCCATCCTCTGTTCATGGTTATCAACAATTTCAAGCAGAGGTTAAACTTCTTATGAGAGTTCATCACAAAAGTTTGACCTCCCTTGTTGGTTACTGTAATGAAGGAACCAATAAGGGTCTCGTATACGAGTACATGGCCAACGGAAACTTACAAGAACATCTCTCTGGTAAACGAAGCCAAAGAAATTTCTTGAACTGGGAAAAGAGACTTCGAATCGCAGTGGATGCAGCCTTAGGATTGGAGTATCTGCAAAATGGTTGTAAGCCACCAATATTCCACAGAGATGTAAAATCTACAAACATCTTGTTGAATGAACACCTCCATGCAAAATTATCTGATTTTGGTCTGTCCAAAGCTGTCCTAACAGATGGGGGAACTCATGTGTCAACTGTCATTGCTGGTACTCCTGGTTATCTAGACCCTGAATACTACCTAACCAGTAGATTAACAGAGAAGAGCGACGTTTATAGCTTTGGCGTTGTGCTTCTAGAGATAATCACGGGGCAACCAGTGATAGCGAAGAATGAAGAAAAAAGTCACATAAGTGAATGGGTTAGGTCCTTGATTGGGAAAGGTGATATCAATGCTATTGTTGACTCAAGGTTAGAAGGAGAGTTTGATAGTAACTCAGTTTGGAAAGCAGTAGAAATAGCAACGGCATGTGTATCTCCAAATCCCAACAGAAGGCCAATCATAAGTGTGGTAGTGAGTGAACTGAATGAGTCTTTATCTTTAGCAACGGAATTAGCTCAAACTAAATATAGAAGCACTGATACAAGTGATCCAGTTAAACGGGTCACCATGAATCTGAATATAGAATCTCTTCCCCGTGCCAGGTAA 2643 0.4052 MGMSSIFVGALVLVILIQAKGQPGFISIDCGAEAGVNYTEPSLDINYVSDANFINTGVRGIITSEETSTHTQRQLWRLRSFPEGKRNCYKISVTRGSKYLVRTVFLYGNYDGRNMLPQFDLLLGANLWDTVTIKNASIDQSMEIIHVSSLDFIQICLVYTGNGTPFITAIELRTLNNDTYVTPGSLERYMRCDLGSNTVYRYGYDDYDRIWSTCDFKENWTQLSVSISDDSFVENEYKPEATIMSTAVTPANDNAPLVIRWEPEHETDEFSVYMHFTELQVLTTNQTRQFNMSGALFLQNYSPPYMRVFTIYSVSALSGKEIKFSLERTENSTLPPIMNAIEIYKVKQFHQSDTFQGDVDAITSIKSVYGVKRDWEGDPCAPAAYLWDGLNCSYQGIESPRITTLNLSSSGLHGKIAPSISNLTMLEILDLSNNSLNGEIPDFLSQLQHLKILNLEKNNLSGLIPPALNKDSLLLRVDQNPYLCEADQSNKKKKKKHNSIATPIVASVGGVLILLVVVAAMLWTAKRRKAKALMLEKDQSAISPQYTEQNDSSLRFQKQIYSYSDIVKITNNFTTIVGKGGFGTVYLGYIEDTPVAVKMLSPSSVHGYQQFQAEVKLLMRVHHKSLTSLVGYCNEGTNKGLVYEYMANGNLQEHLSGKRSQRNFLNWEKRLRIAVDAALGLEYLQNGCKPPIFHRDVKSTNILLNEHLHAKLSDFGLSKAVLTDGGTHVSTVIAGTPGYLDPEYYLTSRLTEKSDVYSFGVVLLEIITGQPVIAKNEEKSHISEWVRSLIGKGDINAIVDSRLEGEFDSNSVWKAVEIATACVSPNPNRRPIISVVVSELNESLSLATELAQTKYRSTDTSDPVKRVTMNLNIESLPRAR* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1684 880 Gene3D Phosphorylase Kinase; domain 1 558 645 - -
Pvu5g1684 880 Pfam Leucine Rich Repeat 449 468 IPR001611 GO:0005515
Pvu5g1684 880 Pfam Leucine Rich Repeat 426 445 IPR001611 GO:0005515
Pvu5g1684 880 SUPERFAMILY Protein kinase-like (PK-like) 549 839 IPR011009 -
Pvu5g1684 880 CDD STKc_IRAK 577 842 - -
Pvu5g1684 880 Pfam Malectin-like domain 28 346 IPR024788 -
Pvu5g1684 880 Gene3D Transferase(Phosphotransferase) domain 1 646 865 - -
Pvu5g1684 880 Gene3D Ribonuclease Inhibitor 360 484 IPR032675 -
Pvu5g1684 880 SUPERFAMILY L domain-like 357 470 - -
Pvu5g1684 880 Pfam Protein tyrosine and serine/threonine kinase 574 840 IPR001245 GO:0004672|GO:0006468
Pvu5g1684 880 PANTHER OS07G0107800 PROTEIN-RELATED 11 880 - -
Pvu5g1684 880 SMART serkin_6 571 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1684 880 ProSiteProfiles Protein kinase domain profile. 571 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1684 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 692 704 IPR008271 GO:0004672|GO:0006468
Pvu5g1684 880 ProSitePatterns Protein kinases ATP-binding region signature. 577 598 IPR017441 GO:0005524
Pvu5g1684 880 PANTHER PUTATIVE-RELATED 11 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1684 Pvu-Chr5 38869901 38874129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1684 1 880 Receptor kinase-like Gene Family AT1G51800 46.896 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1684 Malectin_like 2.1e-103 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1684 - - pvu:PHAVU_005G162300g 1417.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1684 5 38869901 38874129 Pvu5g1684 5 38869901 38874129 ECH