Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1683 ATGGAAAGAAAGGGCTTCTCCATGAGTTTGGTCTTCTTGTTCTTGAATGTTGGCTTCCTTTTCATCTTGATTTGCATCATAAGTAAACACAGCAAATCAAAGTTCTTTAGCTGGGAAGAGAGACTTCGTATAGCAATGGATGCAGCCCTAGGATTGGAGTATCTTCAAACTGGATGCAACCCTCCTATAATCCATAGAGACATAAAATCTACAAACATCTTGTTGGATGAAAAGTTCCAAGCAAAGTTATCTGATTTTGGTCTATCCAAAGTTATCCCAATTGATGAGGTAACTCATGTGTCAACTGTTGTTGCTGGTACTCCTGGTTATCTAGACCCCGAGTACTACATATCCAATAGATTGACACAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATCATCACTTATCAACCTGTAATAGAGGGGAATGAAAAAAGGAGTCACATCATTGAACGGGTTAGATCACTGATTGAAAAAGGGGATATCAAGGCCATTGTTGACTCAAGGTTAGAGGGAGATTTTGACATTAATTCAGCTTGGAAAGCTGTACAGATAGCAATGGCATGTGTTTCATTAAATCCCAGTGAAAGGCCAATGATGACGATGATAGTGACTGAACTAAAGGAGACTTTAGCAACCCAAATAGCACGAACTAAACTCATTCCTGCTCATCTATCAACAGATTCAATTGAACCGCTCACCGTGAATCTGGACACTGAATTCACTCCTCTGGGGAGGTAA 753 0.3958 MERKGFSMSLVFLFLNVGFLFILICIISKHSKSKFFSWEERLRIAMDAALGLEYLQTGCNPPIIHRDIKSTNILLDEKFQAKLSDFGLSKVIPIDEVTHVSTVVAGTPGYLDPEYYISNRLTQKSDVYSFGVVLLEIITYQPVIEGNEKRSHIIERVRSLIEKGDIKAIVDSRLEGDFDINSAWKAVQIAMACVSLNPSERPMMTMIVTELKETLATQIARTKLIPAHLSTDSIEPLTVNLDTEFTPLGR* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1683 250 PANTHER OS07G0107800 PROTEIN-RELATED 25 223 - -
Pvu5g1683 250 ProSiteProfiles Protein kinase domain profile. 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1683 250 Pfam Protein kinase domain 25 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1683 250 SUPERFAMILY Protein kinase-like (PK-like) 32 211 IPR011009 -
Pvu5g1683 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 63 75 IPR008271 GO:0004672|GO:0006468
Pvu5g1683 250 Gene3D Transferase(Phosphotransferase) domain 1 23 227 - -
Pvu5g1683 250 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE 25 223 - -
Pvu5g1683 250 SMART serkin_6 1 215 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1683 Pvu-Chr5 38865201 38866152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1683 36 250 Receptor kinase-like Gene Family AT2G28970 56.744 1.17e-83 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1683 Pkinase 2e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1683 - - gmx:100795183 342.813