Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1680 ATGGGAATGTTGAGGTGTTTCCTTGTTGGTTTTGTTGGTTTTCTAGTTCTTGCCACACTGATTCAAGCTCAGGACCAATCAGGATTCATCAGCATAGACTGTGGAGTTACTCCAGGTGTTAGCTATACTGAGTCGAATACGGGCGTAAATTATACTTCAGATGCAAATTTAATAAATACTGGTGTGAGTATGTCAATAGAATCTAATCTGAAAAATGACTATTATCGATATATGTGGACTCTCAGAAGCTTCCCGGAAGGAAAAAGGAACTGCTACAAAATAAACATCACAAGAGGCTCTAAGTATCTGATCAAGACTATTTTTTTGTACGGAAATTATGATGGGCTGAATAAGCTACCAAAGTTTGATGTTCATCTCGGGGCTAATCGGTGGAGTACAGTGAGCATAAACAAGGAATCAACTGAGAGGAGCAATGAGATCATACATGTGCCTTCACTGGATTATGTACAGATCTGTCTGGTTGACACTGGCCATGGAACACCATTTATATCAGCCATACAACTGAGAACTTTGACAGATGATATTTATGTCACTGAATCTGGATCATTGGAAACTCACACCCGGTGGGATATGGGTTCAAACACCACCTACAGGTACAAGGATGATGTTTATGATCGTTACTGGAGCTATGATGACAACATCAATGACTGGAAACAATTAAGTGTTTCGATTTCTGCTGATGCTTTAGAGCAGAACGTATACAAACCGCCAGCAATTGTGATGAGCACTGCAGTTACACCATCAAATGTTAGTGCTCCATTGGAAGTAATAAACTGGATGCCAGATGATCCAACTGATAAATTCTATGTTTACATGTACTTCATGGAGATTCAAGAGTTAGCGACGAATCAGACAAGAGAATTCAACATCGTGGAAAATGGTAAACAGGTGTATTCAAAGTTTTCACCGAAGAATCTGCTCGCTACCACTTTATTTAGCTTGTCAGCCTCCAGTGGGGATGAAATTATATATTCTCTTGTAAAGACCAAAAACTCAACCCTGCCTCCCATCATCAATGCCCTTGAAATTTACAAAGCAATAGATTTCCCGCAATCAGAAACATTCAAAGGAGATGATGATGCCATTACAGCCATCAAATCAATTTATGGGGTCACAAGAGATTGGCAAGGTGATCCATGTGCCCCTATAGATTACTTGTGGGAGGGTTTGAATTGTAGTTATAACAAAAAAGAGTCTCCAAGAATCACAACTTTGGATTTATCTTCAAGTGGGTTGTCAGGAAAGATAGACCCTTCAATTTCAAACCTCAGCATGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAAGCGGTGAAATTCCTGATTTTCTGTCTCAATTTCAACACTTAAAGATATTAAACTTGGAGAAGAATAACCTCTCTGGTTTAATTCCCTCGGCACTTGTTGAAAAATCCAAGAAAGGTTCTCTGTTACTAAGTGTGGACCAAAATCCAATTCTCTGTGAATCTGGTCAATGCAACGTGCAGGATGAGGAAAAGAAAGAGAAAAACAACATTGTTGCACCCATAGCATCAGTTAGTGGGGTTGTGATCCTTCTCATTGTCGTGGTAGCTGTATGGACGCTTAAAAGGAGAAAATTGAAAGCTTTGATAGTAGAAAGGGATCAAAGTCAGATCTCACCACAATACACAAAACAAGATGATTTAGTGCTATCATTGAGAAAACAAATTTATTCCTACTTCGATGTCCTTAAAATCACCAATAATTTCAATACACCTCTCGGTAAAGGAGGATTTGGAACTGTTTATCTGGGCCATATCGATGACACTCCAGTTGCAGTGAAAATGCTTTCCTCATCGTCTGTCCAGGGGTTTCAACAATTTCAGGCAGAGGTTAAACTTCTAATGAGAGTTCATCACAAAAATTTAACCTCCCTCGTTGGTTATTGTAATGAAGAAACCAATAAGGGTCTCATATATGAGTACATGGCTAATGGAGACTTACACGAACATCTCTCTGGTAAACACAGCAAAACAAAATTCTTCACGTGGGAAGAAAGACTTCGTATAGCAGTGGATGCAGCCTTAGGTTTGGAGTATCTGCAAAATGGTTGCAAGCCGCCTATAATCCACAGAGACATAAAATCTACAAACATCTTGTTGAATGAACAGTTCCAAGCAAAGTTAGCTGATTTTGGTCTATCCAAAATTATCCCAACTGAAGGTGAAACTCACGTGTCAACTGTTGTTGCCGGTACTCCTGGTTATCTAGACCCAGAGTACTTCATAACAAATAGATTGACAGAGAAGAGTGATGTTTTCAGTTTTGGAGTTGTTCTTTTGGAGATAATCACAAATCAACCAGTGATAATGAGAGGTGAAGAAACTATTCACATAAGTGAATGGGTTAGATCCTTGGTTTTGAAAGGGGATATCAAAGCCATTGTTGACCCAAGGCTAGAAGGAGATTATGATACCAATTCAGTTTGGAAAGCAGTAGAAATAGCAACAGAATGTGTGTCTCCAAATATGAACAGAAGGCCTGTCACAAGCGTGATAGTGATTGAACTGAAGGAGTCTTTATCAATGGAAGTAGCTCGAACAAAATACAGAGGTAACCATTTAACACATTCAGGGGTGTCCATGAATCTGAATACCGAGTTTATTCCTCATGCCAGATAA 2664 0.3911 MGMLRCFLVGFVGFLVLATLIQAQDQSGFISIDCGVTPGVSYTESNTGVNYTSDANLINTGVSMSIESNLKNDYYRYMWTLRSFPEGKRNCYKINITRGSKYLIKTIFLYGNYDGLNKLPKFDVHLGANRWSTVSINKESTERSNEIIHVPSLDYVQICLVDTGHGTPFISAIQLRTLTDDIYVTESGSLETHTRWDMGSNTTYRYKDDVYDRYWSYDDNINDWKQLSVSISADALEQNVYKPPAIVMSTAVTPSNVSAPLEVINWMPDDPTDKFYVYMYFMEIQELATNQTREFNIVENGKQVYSKFSPKNLLATTLFSLSASSGDEIIYSLVKTKNSTLPPIINALEIYKAIDFPQSETFKGDDDAITAIKSIYGVTRDWQGDPCAPIDYLWEGLNCSYNKKESPRITTLDLSSSGLSGKIDPSISNLSMLEKLDLSNNSLSGEIPDFLSQFQHLKILNLEKNNLSGLIPSALVEKSKKGSLLLSVDQNPILCESGQCNVQDEEKKEKNNIVAPIASVSGVVILLIVVVAVWTLKRRKLKALIVERDQSQISPQYTKQDDLVLSLRKQIYSYFDVLKITNNFNTPLGKGGFGTVYLGHIDDTPVAVKMLSSSSVQGFQQFQAEVKLLMRVHHKNLTSLVGYCNEETNKGLIYEYMANGDLHEHLSGKHSKTKFFTWEERLRIAVDAALGLEYLQNGCKPPIIHRDIKSTNILLNEQFQAKLADFGLSKIIPTEGETHVSTVVAGTPGYLDPEYFITNRLTEKSDVFSFGVVLLEIITNQPVIMRGEETIHISEWVRSLVLKGDIKAIVDPRLEGDYDTNSVWKAVEIATECVSPNMNRRPVTSVIVIELKESLSMEVARTKYRGNHLTHSGVSMNLNTEFIPHAR* 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1680 887 Pfam Leucine Rich Repeat 433 452 IPR001611 GO:0005515
Pvu5g1680 887 Pfam Leucine Rich Repeat 456 475 IPR001611 GO:0005515
Pvu5g1680 887 ProSiteProfiles Protein kinase domain profile. 582 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1680 887 ProSitePatterns Protein kinases ATP-binding region signature. 588 609 IPR017441 GO:0005524
Pvu5g1680 887 PANTHER OS07G0107800 PROTEIN-RELATED 15 884 - -
Pvu5g1680 887 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Pvu5g1680 887 CDD STKc_IRAK 588 853 - -
Pvu5g1680 887 Pfam Protein tyrosine and serine/threonine kinase 584 793 IPR001245 GO:0004672|GO:0006468
Pvu5g1680 887 SUPERFAMILY L domain-like 374 475 - -
Pvu5g1680 887 SUPERFAMILY Protein kinase-like (PK-like) 561 847 IPR011009 -
Pvu5g1680 887 PANTHER PUTATIVE-RELATED 15 884 - -
Pvu5g1680 887 ProSiteProfiles Leucine-rich repeat profile. 432 454 IPR001611 GO:0005515
Pvu5g1680 887 Gene3D Transferase(Phosphotransferase) domain 1 657 871 - -
Pvu5g1680 887 Gene3D Phosphorylase Kinase; domain 1 569 656 - -
Pvu5g1680 887 SMART serkin_6 582 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1680 887 Gene3D Ribonuclease Inhibitor 368 485 IPR032675 -
Pvu5g1680 887 Pfam Malectin-like domain 32 352 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1680 Pvu-Chr5 38826801 38831767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1680 1 887 Receptor kinase-like Gene Family AT1G51800 49.392 0.0 862
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1680 Malectin_like 3.1e-112 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1680 - - gmx:106794186 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1680 5 38826801 38831767 Pvu5g1680 5 38826801 38831767 ECH