Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1679 ATGTGGATCACTTTCTACGTTGCCTTTTTAGCTCTTCTACTTATTCCAGCTCATGCTCAACCAGGATTCATCAGCATAGATTGCGGAGCTGAAGCAGGTGTCAGCTACACTGAGCAATCACTAACCATAAATTACGTTTCCGATGAAAATTTCATAAATACTGGTGTGAGAGGCACAATAGCATCTGAAGAGATCAACAGGAACAATCAACAACAACTGTGGAATCTGAGAAGCTTCCCGGAAGGAAAAAGGAACTGCTACAAAATAAACGTCACAAGAGGCTCTAATTATCTCATCCGCACTACTTTTCTGTATGGAAATTATGATGGCCGAAATATGTTACCAATGTTTGATCTTCTTCTGGGAGCTAACGTGTGGGATACAGTTACTATAGAAAATGCATCCCTTGACCAATCCAAGGAGATCATACATGTGCCTTCACTGGATTTCATACAAATCTGTCTGGTTAACACAGGAAATGGTACACCATTTATAACAGCCATTGAATTGAGGACTTTGAAAAATGATACATATGTCACTCAATTTGGATCACTGGAACTTTACAAAAACTGGCGTTTCGATTTGGGTTCTAACAGAAGCTACAGGTACTGGGTTGATGTTTATGATCGTTTCTGGTATGTCTGGATTCCAGATGATTGGACAAAGCTAAGTGCTTCGATTCCAGATGATTCTTTGAAACAGAACGATTACCGACCGGGAGCAACCATCATGAGCACCGCAGTTACACCGGCAAATGATAGTGCTCCGTTGGTAATAAGATGGGAGCCAAAAGATGAAACTGAGGAATTCTATGTTTACCTGCACTTCACGGAGCTTCAAGCGTTAACCGGGAATCAGACAAGAGAATTCAACATCATGAGCAACGGTAAATTATGGTTTCCAAATTGTTCTCCGGAGTACATGAAAGTCAACACTTTATATAGCAAGTCAGGCACCAGCGGGAAAGAAATTAAATTTTCCCTCGAGAGAACCGAAAATTCAACCCTGCCTCCCATCATCAGTGCCTTTGAAATCTACAGAGTAATAGACTTACAGAAACCTGAAACACTCCAAGGAGATGTTGATGCGATTACAAGCATAAAGTCAGTTTATGGAGTGAAAAGAGATTGGGAAGGTGATCCATGCGCCCCTGCAGCCTACTTGTGGGATGGTCTCAATTGTTCTTATAATGGAATTGAGTCACCAAGAATCACAGCTTTGAATTTATCTTCAAGTGGATTGTCAGGAAAGATAGACCCTTCAATCTCAAAGCTCACCATGTTGGAGAAGCTGGATTTATCTAACAATAACTTAAATGGTGAAGTTCCTGATTTTCTGATTCATTTGCAACACTTGAAGATCTTAAACTTGGAGAAGAATGACCTCTCCGGTTCAATTCCCTCTGCACTTATTGAAAAATCACACGAAGGTTCTCTCTCTCTAAGTGTGGATCAAAATCCATATCTATGTGAATCTGGTCAATGCAACGTGACGAAAAAGAAAAACATTGTTACACCCATAGTAGTATCAATTTGTGGAGTTTTAATTCTTCTAATAGCCGTTCCAATACTGTGGATTATTAAAAGGAAAAAATCAAAAGATTCGGTGGCAGTAAATCATCAGAATGAGATTTCACAGCAATCCACAGAAAAGGATGATTCTTTCCTGCAACGCAAAAGTCAAATGTATTCATACTATGATGTCCTTCAAATCACTAACAATTTCAATAGAATTATCGGTAAAGGAGGATTTGGAACAGTTTACCTGGGCTTTATCGATGAGACTCCAGTTGCAGTGAAAATGCTTTCCCCATCAGCAGTTCATGGTTATCAACAATTTCAGGCAGAGGTTAAACTTCTAATCAGAGTTCATCACAAAAATTTGACATCCCTTATTGGTTATTGTAACGAAGGAAGCAACCAGGGTCTCATATATGAGTACATGGCTAAAGGGAACTTACGAGAACATCTCTCAGGTAAATACAACGAATCACCATTCTTGAGCTGGAAGGAAAGACTTCGTGTAGCAGTGGATGCAGCCCAAGGGTTGGAATATCTGCAAAATGGTTGCAAGCCTCCTATAATCCACAGAGATGTAAAATCTGCAAACATCTTGTTGGATGAACACTTCCAAGCAAAATTATCTGATTTCGGTCTATCCAAAGTTGTCCCAGATGATGGGGCATCTCATGTGTCAACTATTGTCGCTGGTACTCTTGGTTATCTGGACCCTCACTACCACTCTTCCAATAGATTAACACAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTTTTGGAAATAATCACAAATCAATCAGTAATGGCAGGGAATGAAGAAAATGGTCACATAAGTGAACGAGTTAGCTCCATGATATCTACAGGGGATATCAGGGCCATAGTTGACTCAAGGTTAGAAGGAAATTTTGACATTAACTCCGCATGGAAAGCCCTAGAAATAGCAATGGCTTGTGTTTCTCCAAATCCAAACGAAAGGCCAATGATGAGTGTGGTGGTGATTGAACTACAGGCGACTTTAGCGACGGAATTAGCTAGAACAGAGCATAATAATGGTGGTGATTCTAGGTATTCAGTTGCAGCGGTCAGCGTGGATTTAGATACCGAATTTATGCCCTTGGCTAGGTAA 2646 0.4014 MWITFYVAFLALLLIPAHAQPGFISIDCGAEAGVSYTEQSLTINYVSDENFINTGVRGTIASEEINRNNQQQLWNLRSFPEGKRNCYKINVTRGSNYLIRTTFLYGNYDGRNMLPMFDLLLGANVWDTVTIENASLDQSKEIIHVPSLDFIQICLVNTGNGTPFITAIELRTLKNDTYVTQFGSLELYKNWRFDLGSNRSYRYWVDVYDRFWYVWIPDDWTKLSASIPDDSLKQNDYRPGATIMSTAVTPANDSAPLVIRWEPKDETEEFYVYLHFTELQALTGNQTREFNIMSNGKLWFPNCSPEYMKVNTLYSKSGTSGKEIKFSLERTENSTLPPIISAFEIYRVIDLQKPETLQGDVDAITSIKSVYGVKRDWEGDPCAPAAYLWDGLNCSYNGIESPRITALNLSSSGLSGKIDPSISKLTMLEKLDLSNNNLNGEVPDFLIHLQHLKILNLEKNDLSGSIPSALIEKSHEGSLSLSVDQNPYLCESGQCNVTKKKNIVTPIVVSICGVLILLIAVPILWIIKRKKSKDSVAVNHQNEISQQSTEKDDSFLQRKSQMYSYYDVLQITNNFNRIIGKGGFGTVYLGFIDETPVAVKMLSPSAVHGYQQFQAEVKLLIRVHHKNLTSLIGYCNEGSNQGLIYEYMAKGNLREHLSGKYNESPFLSWKERLRVAVDAAQGLEYLQNGCKPPIIHRDVKSANILLDEHFQAKLSDFGLSKVVPDDGASHVSTIVAGTLGYLDPHYHSSNRLTQKSDVYSFGVVLLEIITNQSVMAGNEENGHISERVSSMISTGDIRAIVDSRLEGNFDINSAWKALEIAMACVSPNPNERPMMSVVVIELQATLATELARTEHNNGGDSRYSVAAVSVDLDTEFMPLAR* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1679 881 CDD STKc_IRAK 579 843 - -
Pvu5g1679 881 ProSiteProfiles Protein kinase domain profile. 573 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1679 881 Gene3D Transferase(Phosphotransferase) domain 1 648 867 - -
Pvu5g1679 881 SMART serkin_6 573 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1679 881 PANTHER PUTATIVE-RELATED 10 881 - -
Pvu5g1679 881 PANTHER OS07G0107800 PROTEIN-RELATED 10 881 - -
Pvu5g1679 881 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Pvu5g1679 881 Pfam Malectin-like domain 26 348 IPR024788 -
Pvu5g1679 881 ProSitePatterns Protein kinases ATP-binding region signature. 579 600 IPR017441 GO:0005524
Pvu5g1679 881 Pfam Protein tyrosine and serine/threonine kinase 575 840 IPR001245 GO:0004672|GO:0006468
Pvu5g1679 881 Gene3D Ribonuclease Inhibitor 362 484 IPR032675 -
Pvu5g1679 881 Gene3D Phosphorylase Kinase; domain 1 544 647 - -
Pvu5g1679 881 SUPERFAMILY Protein kinase-like (PK-like) 555 841 IPR011009 -
Pvu5g1679 881 SUPERFAMILY L domain-like 349 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1679 Pvu-Chr5 38815045 38820678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1679 9 881 Receptor kinase-like Gene Family AT1G51800 47.748 0.0 807
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1679 Malectin_like 7.4e-110 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1679 - - gmx:100170722 1217.6