Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1675 ATGTGGATGACTTTCTACGTTGCTCTTTTAGCTGTTCTACTTCTTCAAGTTCATGCTCAACCAGGATTTATCAGCATAGATTGCGGAGCTGAAGCAGGTGTCAACTATACTGACACACTTGGTATAAATTACGTTTCGGATGCAAATTTCACAAATACTGGTGTGAGATCGACAATATCATCTGAGGAGATCAGCAGGCACAGTCAACGACAACTGTTGAGGCTGAGAAGTTTCCCAGAAGGAAAAAGGAACTGCTACAAAATAAGCGTCACAAGAGGCTCTAAGTATCTCATCCGCACTCTTTTTCTTTATGGAAATTATGATGTCCGAAATATGTCACCACAGTTTGATCTTCATCTGGGACCTAACCTGTGGGATACAGTCACTATACACAATGCATCCTCTTACCAATCCAATGAGATCATACATGTACCTTTACAGGATTTCGTACAAATCTGTCTGGTTAACACAGGAAATGGTACACCATTTATAACAGCCATAGAATTGAGAATTTTGAAAAATAATACATACGTTACTGAATCAGGATCACTGAAACGTTACCGGCGATATGATTTGGGTTCTAACAGAAGCTACAGGTACTCGGTTGATGTTTATGATCGTTTCTGGTATGTCTGGGACAAAAAAAATTGGACTAAGTTAAGTGCTTCGATTCCAGATAATTCTTTGATAGAGAATGATTACCGACTGGGAGCAACCATCATGAGCACCGCAGTTACACCAGCAAATGGTAGTGCTCCGTTGGTAATAAGCTGGGAGGCAGAAAATGAAACTGAGGAATTCTATATGTACATGCACTTCACGGAGATCCAGGTGTTAACCACGAATCAGACAAGACAATTCAACATCAGGAGGAACGGTGAATCAGGGTGGTGGTTTCAAAATTTCTCCCCACTGTACCACAATGTCACTACTCTATATACCCCGTCAGCCATCAGCGGGAAAGTAATTACATATTCACTGGAGATGACCAAAAATTCTACCCTGCCTCCCATCATCAATGCCATTGAAATTTACAAACTAAAACAATTCCATCAATCTGAAACATTCCAAGAAGATGTCGATGCGATTACAAGCATCAAGTCAGTTTATGGGCTGACAAGAGATTGGGAAGGTGATCCATGCGCCCCTGCAGCCTACTTGTGGGATGGTTTGAACTGTACCTATGGCGACAACGAGGTCCCAAGAATCACAACTTTGAATTTAGGATCAAGTGGATTGTCAGGAAAGATAAACCCTTCAATCTCAAAGCTCACCATGTTGGAGAATCTGGATTTATCTAACAACAACTTAAGTGGTGAAGTTCCTGATTTTCTGATTCAGTTGCAACACTTGAAGATCTTAAACTTGGAGAAGAATAACCTCTCCGGTTCAATTCCCTCTTCACTTATTGCAAAATCACACGAAGGTTCTCTCTCACTAAGTGTGGGTCAAAATCCAAATCTATGTGAATCTGGTCAATGCAACGAGACGAAAAAGAAAAACATAGTTACGCCCATAGTAGTATCCATTTGTGGGGTTTTAATTCTTCTAATAGCCGTTGCAATACTGTGGATCTGTAAAAGGAAAAAATCAAAAGATTCGGTGGCAGTAAATCATCAGAATAAGATTTCACAGCAATCCACAGAAAAGGATGATTCGTTCCTGCAACACAAAAGTCAAATGTATTCATACATTGATGTCCTTCAAATCACTAACAATTTCAATAGAATTATTGGTAAAGGAGGATTTGGAACAGTTTACCTGGGCTTTATCGATGAGACTCCAGTTGCAGTGAAAATGCTTTCCCCATCAGCAGTTCATGGTTATCAACAATTTCAGGCAGAGGTTAAAGTTCTAATCAGAGTTCATCACAAAAATTTGACATCCCTTATTGGTTACTGTAACGAAGGAACCAACAAGGCTCTCATATATGAGTACATGGCTAAAGGGAACTTACGAGAACATCTCTCAGGTAAATACAACGAATCACCATTCTTGAGCTGGAAGGAAAGACTTCGTGTAGCAGTGGATGCAGCCCTAGGGTTGGAATATCTGCAAAATGGTTGCAAGCCTCCTATAATCCACAGAGATGTAAAATCTGCAAACATCTTGTTGGATGGACACTTCCAAGCAAAATTATCTGATTTCGGTCTATCCAAAGTTGTACCAGTTGATGGGGCATCTCATGTGTCAACTATTGTTGCTGGTACTTTTGGTTATCTGGACCCTCACTACCACTCTTCCAATAGATTAACACAGAAAAGTGATGTTTATAGCTTTGGAGTTGTTCTCTTGGAAATAATCACAAATCAATCAGTAATGGCAGGGAATGAAGAAAATGGTCACATAAGTGAACGAGTTAGATCCATGATACCAACGGGGGATATCAGGGCCATAGTTGACTCAAGGTTAGAAGGAAATTTTGACATTAACTCCGCATGGAAAGCCCTAGAAATAGCAATGGCTTGTGTTTCTCCAAATCCCAACGAAAGGCCAATGATGAGTGTGGTGGTGATTGAACTACAAGAGAGTTTGGCCACGGAATTAGCTAGAACAGAGCATAACAATGGTGGTGATCCTAGGTACTCAGTTGCGGAGGGGAGCGAGGATTTAGACACCGAATTCATGCCCTTTGCTAGGTAA 2643 0.4064 MWMTFYVALLAVLLLQVHAQPGFISIDCGAEAGVNYTDTLGINYVSDANFTNTGVRSTISSEEISRHSQRQLLRLRSFPEGKRNCYKISVTRGSKYLIRTLFLYGNYDVRNMSPQFDLHLGPNLWDTVTIHNASSYQSNEIIHVPLQDFVQICLVNTGNGTPFITAIELRILKNNTYVTESGSLKRYRRYDLGSNRSYRYSVDVYDRFWYVWDKKNWTKLSASIPDNSLIENDYRLGATIMSTAVTPANGSAPLVISWEAENETEEFYMYMHFTEIQVLTTNQTRQFNIRRNGESGWWFQNFSPLYHNVTTLYTPSAISGKVITYSLEMTKNSTLPPIINAIEIYKLKQFHQSETFQEDVDAITSIKSVYGLTRDWEGDPCAPAAYLWDGLNCTYGDNEVPRITTLNLGSSGLSGKINPSISKLTMLENLDLSNNNLSGEVPDFLIQLQHLKILNLEKNNLSGSIPSSLIAKSHEGSLSLSVGQNPNLCESGQCNETKKKNIVTPIVVSICGVLILLIAVAILWICKRKKSKDSVAVNHQNKISQQSTEKDDSFLQHKSQMYSYIDVLQITNNFNRIIGKGGFGTVYLGFIDETPVAVKMLSPSAVHGYQQFQAEVKVLIRVHHKNLTSLIGYCNEGTNKALIYEYMAKGNLREHLSGKYNESPFLSWKERLRVAVDAALGLEYLQNGCKPPIIHRDVKSANILLDGHFQAKLSDFGLSKVVPVDGASHVSTIVAGTFGYLDPHYHSSNRLTQKSDVYSFGVVLLEIITNQSVMAGNEENGHISERVRSMIPTGDIRAIVDSRLEGNFDINSAWKALEIAMACVSPNPNERPMMSVVVIELQESLATELARTEHNNGGDPRYSVAEGSEDLDTEFMPFAR* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1675 880 CDD STKc_IRAK 578 843 - -
Pvu5g1675 880 PANTHER PUTATIVE-RELATED 10 879 - -
Pvu5g1675 880 Gene3D Phosphorylase Kinase; domain 1 553 646 - -
Pvu5g1675 880 Gene3D Transferase(Phosphotransferase) domain 1 647 861 - -
Pvu5g1675 880 Gene3D Ribonuclease Inhibitor 360 482 IPR032675 -
Pvu5g1675 880 SUPERFAMILY L domain-like 397 469 - -
Pvu5g1675 880 Pfam Malectin-like domain 26 346 IPR024788 -
Pvu5g1675 880 ProSitePatterns Protein kinases ATP-binding region signature. 578 599 IPR017441 GO:0005524
Pvu5g1675 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Pvu5g1675 880 SUPERFAMILY Protein kinase-like (PK-like) 554 839 IPR011009 -
Pvu5g1675 880 SMART serkin_6 572 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1675 880 ProSiteProfiles Protein kinase domain profile. 572 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1675 880 PANTHER OS07G0107800 PROTEIN-RELATED 10 879 - -
Pvu5g1675 880 Pfam Protein tyrosine and serine/threonine kinase 574 839 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1675 Pvu-Chr5 38756911 38761314 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1675 5 880 Receptor kinase-like Gene Family AT1G51800 47.433 0.0 804
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1675 Malectin_like 7.8e-107 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1675 - - gmx:100779102 1170.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1675 5 38756911 38761314 Pvu5g1675 5 38756911 38761314 ECH