Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1674 ATGGGAATGTCATCGACTTTCGTAGGAGTTCTAGTTCTTGTCATTCTGATTCAGGCTAAGGGCCAACCAGGATTCATCAGCATAGATTGCGGAGCCGAACCAGGTGTGAACTATACCGAGCCATCATTAGACATAAATTATGTCTCGGATGCAAATTTCATAAATACGGGTGTGAGAGGGATAATAACATCTGAAGAGATCAGCACACACACTCAACGACAACTGTGGAAGCTGAGAAGCTTCCCTGAAGGAAAAAGAAACTGCTACAAAATAAGCATCACAAGAGGCTCTAATTATCTCATCCGCACCACTTTTCTGTATGGAAATTATGATGGCCGAAATATGCTACCACAGTTTGATCTTCTTCTGGGAGCTAACAAGTGGGATACAGTCACTATAAACAATGCATCCATTGATGAAGTCTATGAGATCATACATATACCTTCACTGGATTTCGTACAAATCTGTCTGGTTAACACAGGAAATGGTACACCATTTATAACAGCCATTGAATTCAGGACTTTGAAAAATGATACATACGTCACTGAATCGGTATCACTGGAACTTTATAATTACCTGCGATGCGATTTGGGTTCTAACAGAGGCTACAGGGCGTCTGATGATTATGATCGTTTCTGGTATACCTGTGACTTCGAGGAAGATTGGACACGGCTAAATGCCTCGATTCCTGATGATTCTTTTGTTGATAACGATTTCAAACCGGGAGCAACCATCATGAGCACCGCAGTTACACCAGCAAATGGTAGTGCTCCGCTGGTAATAAGCTGGGAGCCAGATGATGAAACTGCAGAATTCTATGTATACATGCATTTCACGGAGCTTCAGGTGTTAACCACCAATCAGACAAGACAATTCAACATCACCATGAACGGTGAATTATGGTATGACAATTTATCTCCGCAGTACATGAGCGTCAGCACTATATATAGCCCGCCAGGCGGCAGCGGGAAAGAAATTAAATTTTCCCTGGAGAGGACCGAAAATTCAACCCTACCTCCCTTCATCAATGCCATTGAAATTTTCAAAGTAAAACATTTTCATCAATCTGATACATTCCAAGGAGATGTTGATGCGATTACAAAAATCAAGTCAGCTTATGGAGTGAACAGAGATTGGGAAGGTGATCCATGCGCCCCTGCAGCCTACTTGTGGGATGGTCTCAATTGTTCTTATCACGGAATTGAGTCCCCAAGAATCACAACTTTGAATTTGTCTTCAAGTGGATTGCATGGAAAGATTGCCCCTTCAATTTCAAATCTCACCATGCTGGAGATGTTGGATTTATCAAACAATAGCTTAAACGGTGAAATTCCTGATTTTCTGTCCCAACTGCAACACTTGAAGATCTTAAACTTGGAGAAGAATAACCTCTCTGGTTTAATTCCACCAGCACTAAATAAAGATTCCCTCTTACTACGTATCGACCAAAATCCATATCTATGTGAAGCTGATCAATGCAACAAGAAGAAAAACAAGAAACACAATAGCATTGCTACACCCATTGTAGCATCAGTTGGCGGGGTTTTGATCCTTCTGGTAGTAGTGGCAGCTATATTGTGGACAACTAAAAGAAGAAAAGCGAAAGCTTTGAAGTTAAAAAAGGATCAAAGTGCCATATCACCGCAATACACTGAACAAAATGATTCATCACTTCAATACCAAAAACAAATATATTCATACTCTGATATCATTACAATCACCAACAATTTCAATACAATTGTTGGTAAAGGAGGATTTGGAACAGTTTATCTGGGCTATATCGAAGACACTCCAGTTGCAGTGAAAATGCTTTCCCCATCATCTGTTCATGGTTATCAACAATTTCAAGCAGAGGTTAAACTTCTTATGAGAGTTCATCACAAAAATTTGACTTCCCTTGTCGGCTATTGTAATGAAGGAACCCATAAGGGTCTTGTATACGAGTACATGGCTAATGGAAACTTACAGGAACATCTCTCTGGTAACCGAAGCAAAAGAAATTTCTTGAGCTGGGAAAAGAGACTTCGAATAGCAGTGGATGCAGCCTCAGGATTGGAGTATCTGCAAAATGGTTGTAAGCCACCAATATTCCACAGAGATGTAAAATCTACAAACATCTTGTTGAATGAACACCTCCATGCAAAATTATCTGATTTTGGTCTATCCAAAGTCATCCTAACAGATGGGGGAACTGATGTGTCAACTGTTATTGCTGGTACTCCTGGTTATCTAGACCCTGAATACTACCTAACCAGTAGATTAACAGAGAAGAGCGACGTTTATAGCTTTGGCGTTGTGCTTTTAGAGATAATCACAGGTGAACCAGTGATAGTGAAGAATGAAGAAAAAAGTCACATAAGTGAATGGGTAAGGTCCAAGATGGCTAAAGGTGATATCTATGACATTGTTGACTCAAGGTTAAAAGGAGAGTTTGATAGTAACTCAGTTTGGAAAGCAGTAGAAATAGCAACAGCATGTGTATCTCCAAATCCCAACAGAAGGCCAATCATAAGTGTGGTAGTGAGTGAACTGAAGGAGTCTTTATCTTTGGAATTAGCTCAAACTAAAGATAGAAGCACTGATACAAGTGATTCAGTTAAACAGGTCGCCATGAATCTGATTATAGAATCTCTTCCCCATGCTAGGTAA 2649 0.4009 MGMSSTFVGVLVLVILIQAKGQPGFISIDCGAEPGVNYTEPSLDINYVSDANFINTGVRGIITSEEISTHTQRQLWKLRSFPEGKRNCYKISITRGSNYLIRTTFLYGNYDGRNMLPQFDLLLGANKWDTVTINNASIDEVYEIIHIPSLDFVQICLVNTGNGTPFITAIEFRTLKNDTYVTESVSLELYNYLRCDLGSNRGYRASDDYDRFWYTCDFEEDWTRLNASIPDDSFVDNDFKPGATIMSTAVTPANGSAPLVISWEPDDETAEFYVYMHFTELQVLTTNQTRQFNITMNGELWYDNLSPQYMSVSTIYSPPGGSGKEIKFSLERTENSTLPPFINAIEIFKVKHFHQSDTFQGDVDAITKIKSAYGVNRDWEGDPCAPAAYLWDGLNCSYHGIESPRITTLNLSSSGLHGKIAPSISNLTMLEMLDLSNNSLNGEIPDFLSQLQHLKILNLEKNNLSGLIPPALNKDSLLLRIDQNPYLCEADQCNKKKNKKHNSIATPIVASVGGVLILLVVVAAILWTTKRRKAKALKLKKDQSAISPQYTEQNDSSLQYQKQIYSYSDIITITNNFNTIVGKGGFGTVYLGYIEDTPVAVKMLSPSSVHGYQQFQAEVKLLMRVHHKNLTSLVGYCNEGTHKGLVYEYMANGNLQEHLSGNRSKRNFLSWEKRLRIAVDAASGLEYLQNGCKPPIFHRDVKSTNILLNEHLHAKLSDFGLSKVILTDGGTDVSTVIAGTPGYLDPEYYLTSRLTEKSDVYSFGVVLLEIITGEPVIVKNEEKSHISEWVRSKMAKGDIYDIVDSRLKGEFDSNSVWKAVEIATACVSPNPNRRPIISVVVSELKESLSLELAQTKDRSTDTSDSVKQVAMNLIIESLPHAR* 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1674 882 CDD STKc_IRAK 581 846 - -
Pvu5g1674 882 SUPERFAMILY Protein kinase-like (PK-like) 553 843 IPR011009 -
Pvu5g1674 882 Gene3D Ribonuclease Inhibitor 363 488 IPR032675 -
Pvu5g1674 882 Gene3D Transferase(Phosphotransferase) domain 1 650 872 - -
Pvu5g1674 882 Pfam Protein tyrosine and serine/threonine kinase 578 844 IPR001245 GO:0004672|GO:0006468
Pvu5g1674 882 PANTHER OS07G0107800 PROTEIN-RELATED 11 882 - -
Pvu5g1674 882 ProSiteProfiles Protein kinase domain profile. 575 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1674 882 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524
Pvu5g1674 882 SMART serkin_6 575 848 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1674 882 SUPERFAMILY L domain-like 363 478 - -
Pvu5g1674 882 Pfam Malectin-like domain 28 350 IPR024788 -
Pvu5g1674 882 Pfam Leucine Rich Repeat 453 472 IPR001611 GO:0005515
Pvu5g1674 882 Gene3D Phosphorylase Kinase; domain 1 557 649 - -
Pvu5g1674 882 PANTHER PUTATIVE-RELATED 11 882 - -
Pvu5g1674 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 696 708 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1674 Pvu-Chr5 38747208 38751502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1674 1 882 Receptor kinase-like Gene Family AT1G51800 47.456 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1674 Malectin_like 5.8e-107 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1674 - - pvu:PHAVU_005G162300g 1442.94