Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1673 ATGGGAATGTCATTGACTTTCGTAGGAGCTCTAGTTCTTGTCATTCTGATTCAAGCTAAGGGCCAACCAGGATTCATCAGCATAGATTGCGGAGCCGAACCAGGTGTCAACTATACTGAGCCATCATTACACATAAATTATGTTTCTGATGCAAATTTCATAAATACTGGTGTGAGAGGGACAATAACATCTGAAGAGACCAGCACACACACTCAACGACAACTGTGGAGGCTGAGAAGCTTCCCCGAAGGAAAAAGGAACTGCTACAAAATAAGCGTCACAAGAGGCTCTAAGTATCTCATCCGCACCAGTTTTCTGTATGGAAATTATGATGGCCGAAATATTTCACCACAGTTTGATATTCTTCTGGGAGCTAACCTGTGGGCAACAGTGACTATAAAAAATGCATCCATTACCCAATTCAATGAGATCATACATGTACCTTCACTGGATTTCGTACAAATCTGTCTGGTTAACACAGGAAATGGTACACCATTCATAACAGTCATAGAATTGAGGACTTTGAAAAATGATATATACGTCACTGAATCGGGATCACTGGAATATTACCTGCGGTGCGATTTGGGTTCTAACACAGCCCACAGGTACTCGGATGATGCTTATGATCGTTTCTGGCGTACCTGTGACTTGGAAGATTGGACACAGCTAAGTGCTTCGATTTCAGATGATTCTTTTTCTGAGAACGATTACAAACCGGGAGCAACCATCATGAACACCGCAGTTACACCAACAAATAGTAGTGCTCCGTTGGTATTAAGATGGGAGCCAGAAGATCCAACTGAGCAATTCTATGTTTACATGCACTTCGCGGAGATCCAGTTGTTAACGACGAATCAGACAAGACAATTCAACATCAGTCAGAACGCTGAATCGGGGTGGTTGCAAAATTATTCTCCACAGTACCAGAGTGTCCTTACTATATATACCTCGTCGCCCATCAGCGGGAAAGAAATTAAATATTCAGTGGTGAGGACCGAAACTTCTAGCCTGCCTCCCATCATCAATGCCATTGAAATTTACACAGTGAAAGAATTCCAGCAATCTGATACATTCCAAACAGATGTCAATGCGATTACAAGCATCAAGTCAGTTTATGCGGTGACAAGAGATTGGGAAGGTGATCCATGCGCCCCTTTAGCCTACTTGTGGAATGGTCTCAGTTGTTCTTATCACGGAATTGAGTCTCCAAGAATCACAACTTTGAATTTATCTTCAAGTGGATTGCAGGGAAAGATTGACCCTTCAATTTCAAATCTCACCATGCTGGAGATATTGGATTTATCAAACAATAGCTTAAACGGTGAAATTCCTGACTTTCTGTCACAACTGCAACACTTAAAGATCTTAAACATGGAAAAGAATAACCTCTCTGGTTTAATTCCACCAGCACTAAATAAATCTTCCCTCTTACTACGTGTTGACCAAAATCCATATCTATGTGAAGCTGATCAATGCAACATGAAGAAAAACAAGAAAAGCAATAGCATTGTTGCACCCATAGTAGCATCAGTTGGTGGGGTTTTGATCCTTCTGGTAGTAGTGGCAGCTATACTGTGGACCGCTAAAAGAAGAAAAGCGAAAGCTTTGATGTTAAGAAAGGATCAAAGTGCCATATCACCGCAACACACTGACCAAAATGATTCATCACTGCAATTCCAAAAAAAAATATACTCATACTCTGATATCATTAAAATCACCAACAATTTCACTAGAATTGTTGGTAAAGGAGGATTTGGAACAGTTTATTTGGGCTATATCCAAGACACTCCAGTTGCAGTGAAAATGCTTTCCCCATCATCTGTTCGTGGTTATCAACAATTTCAAGCTGAGGTTAAACTTCTTATGACAGTTCATCACAAAAATTTGACCTCCCTTGTTGGTTACTGTAATGAAGGAACCAATAAGGGTCTCGTATACGAGTACATGGAAAACGGAAACTTACAAGAACATCTCTCTGGTAAACAAAGCAAAACAAGTTTCTTGAGCTGGGAAAAGAGACTTCGAATCGCAGTGGATGCTGCCTCAGGATTGGAGTATCTGCAAAATGGTTGTAAGCCACCAATATTCCACAGAGATGTAAAATCTACAAACATCTTGTTGAATGAACACCTCCATGCAAAATTATCTGATTTTGGTCTGTCCAAATTTATCCTAACAGAAGGGGGAACTGATGTGTCAACAGTTATTGCTGGTACTCTTGGTTATCTAGACCCTGAATACTACCTAACCGGTAGATTAACAGAGAAGAGCGACGTTTATAGCTTTGGCGTTGTGCTTTTAGAGATAATCACAGGGCAACCAGTGATAGCGAAGAATGAAGAAAAAGGTCACATAAGTGAATGGGTTAGGTCCGTGATTGGGAAAGGTGATATCAATGCTATTGTTGACTCCAGGTTAGATGGAGAATTTGATAGTAACTCAGTATGGAAAGCAGTAGAGATAGCAACAGCTTGTGTATCTCCAATCAGCAACAGAAGGCCAAGCATAAGTGTGGTAGTGAGTGAACTGAAGGAGTCTTTATCTTTAGCAACGGAAGTAGTTGGAACTAAAGATAGAAGTAATGGTACAAGTAATTCAGCAAAACGGGTCGCCATGAATCTGAATACAGAATCTCTTCCCCAGGCCAGATAA 2652 0.4065 MGMSLTFVGALVLVILIQAKGQPGFISIDCGAEPGVNYTEPSLHINYVSDANFINTGVRGTITSEETSTHTQRQLWRLRSFPEGKRNCYKISVTRGSKYLIRTSFLYGNYDGRNISPQFDILLGANLWATVTIKNASITQFNEIIHVPSLDFVQICLVNTGNGTPFITVIELRTLKNDIYVTESGSLEYYLRCDLGSNTAHRYSDDAYDRFWRTCDLEDWTQLSASISDDSFSENDYKPGATIMNTAVTPTNSSAPLVLRWEPEDPTEQFYVYMHFAEIQLLTTNQTRQFNISQNAESGWLQNYSPQYQSVLTIYTSSPISGKEIKYSVVRTETSSLPPIINAIEIYTVKEFQQSDTFQTDVNAITSIKSVYAVTRDWEGDPCAPLAYLWNGLSCSYHGIESPRITTLNLSSSGLQGKIDPSISNLTMLEILDLSNNSLNGEIPDFLSQLQHLKILNMEKNNLSGLIPPALNKSSLLLRVDQNPYLCEADQCNMKKNKKSNSIVAPIVASVGGVLILLVVVAAILWTAKRRKAKALMLRKDQSAISPQHTDQNDSSLQFQKKIYSYSDIIKITNNFTRIVGKGGFGTVYLGYIQDTPVAVKMLSPSSVRGYQQFQAEVKLLMTVHHKNLTSLVGYCNEGTNKGLVYEYMENGNLQEHLSGKQSKTSFLSWEKRLRIAVDAASGLEYLQNGCKPPIFHRDVKSTNILLNEHLHAKLSDFGLSKFILTEGGTDVSTVIAGTLGYLDPEYYLTGRLTEKSDVYSFGVVLLEIITGQPVIAKNEEKGHISEWVRSVIGKGDINAIVDSRLDGEFDSNSVWKAVEIATACVSPISNRRPSISVVVSELKESLSLATEVVGTKDRSNGTSNSAKRVAMNLNTESLPQAR* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1673 883 Gene3D Transferase(Phosphotransferase) domain 1 649 865 - -
Pvu5g1673 883 SUPERFAMILY L domain-like 358 477 - -
Pvu5g1673 883 Pfam Protein tyrosine and serine/threonine kinase 576 840 IPR001245 GO:0004672|GO:0006468
Pvu5g1673 883 ProSitePatterns Protein kinases ATP-binding region signature. 580 601 IPR017441 GO:0005524
Pvu5g1673 883 PANTHER PUTATIVE-RELATED 11 883 - -
Pvu5g1673 883 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Pvu5g1673 883 ProSiteProfiles Protein kinase domain profile. 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1673 883 Gene3D Ribonuclease Inhibitor 362 488 IPR032675 -
Pvu5g1673 883 Gene3D Phosphorylase Kinase; domain 1 556 648 - -
Pvu5g1673 883 Pfam Malectin-like domain 28 349 IPR024788 -
Pvu5g1673 883 SMART serkin_6 574 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1673 883 Pfam Leucine Rich Repeat 429 448 IPR001611 GO:0005515
Pvu5g1673 883 MobiDBLite consensus disorder prediction 855 883 - -
Pvu5g1673 883 CDD STKc_IRAK 580 845 - -
Pvu5g1673 883 SUPERFAMILY Protein kinase-like (PK-like) 552 843 IPR011009 -
Pvu5g1673 883 PANTHER OS07G0107800 PROTEIN-RELATED 11 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1673 Pvu-Chr5 38738787 38743096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1673 12 883 Receptor kinase-like Gene Family AT2G19210 47.511 0.0 825
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1673 Malectin_like 3.1e-111 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1673 - - pvu:PHAVU_005G162300g 1355.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1673 5 38738787 38743096 Pvu5g1673 5 38738787 38743096 ECH