Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1671 TACTACCTAACCGGTAGATTAACAGAGAAGAGCGACGTTTATAGCTTTGGCGTTGTGCTTTTAGAGATAATCACAGGGCAACCAGTGATAGCGAAGAATGAAGAAAAAAGTCACATAAGTGAATGGGTTAGGTCCTTGATTGGGAAGGGTGATATTAATGCTATTGTTGACTCAAGGTTAGAAGGAGAGTTTGATACTAACTCAGTTTGGAAAGTAGTAGAAATAGCAACGGCATGTGTATCTCCAAATCCCAACAGAAGGCCAATCATAAGCGTGGTAGTGAGTGAACTGAAGGAGTCTTTATCTTTAGCAATGGAATTAGCTCAAACTAAGGATAGAAGGACTGATACAAGTGATTCAGTTAAACAGGTCGCCATGAATCTGATTATAGAATCTCTTCCCCATGCCAGGTAA 414 0.401 YYLTGRLTEKSDVYSFGVVLLEIITGQPVIAKNEEKSHISEWVRSLIGKGDINAIVDSRLEGEFDTNSVWKVVEIATACVSPNPNRRPIISVVVSELKESLSLAMELAQTKDRRTDTSDSVKQVAMNLIIESLPHAR* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1671 137 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE PAM74-RELATED 1 137 - -
Pvu5g1671 137 Gene3D Transferase(Phosphotransferase) domain 1 1 126 - -
Pvu5g1671 137 ProSiteProfiles Protein kinase domain profile. 1 101 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1671 137 SUPERFAMILY Protein kinase-like (PK-like) 2 104 IPR011009 -
Pvu5g1671 137 Pfam Protein tyrosine and serine/threonine kinase 5 97 IPR001245 GO:0004672|GO:0006468
Pvu5g1671 137 PANTHER OS07G0107800 PROTEIN-RELATED 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1671 Pvu-Chr5 38719582 38719995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1671 1 137 Receptor kinase-like Gene Family AT1G51800 53.957 8.17e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1671 PK_Tyr_Ser-Thr 3.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1671 - - pvu:PHAVU_005G162200g 258.07