Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1670 ATGGGAATGTTGAGGTGTTTCCTTGTTGGTTTTGTTGGAGCTCTAGTTCTTGCTGCGCTGATTCAAGCTCAGGACCAATCAGGATTCATCAGCATAGACTGTGGAGCTACTGCAGATGCTAGCTTTACTGAGTCGAAAACGGGCATAAATTATACTTCAGATGCAAATTTAATAAATACTGGTGTGAGTATGTCAATAGAATCTGATCTCAAAAAACAGTATCAGCGATATATGTGGACTCTAAGAAGCTTCCCAGAAGGAAAAAGGAACTGTTACAAAATAAACATCACAAGAGGCTCTAAGTATCTGATCAAGACTGGTTTTTTGTACGGAAATTATGATGGGCTGAATAAGCTACCAAAGTTTGATGTTCATCTCGGGGCTAATCGGTGGAGTACAGTGAACATAAACAATGGATCAATTAACGAGGTAAATGAGATCATACATGTGGCTTCACTGGATTATGTACAGATCTGTCTGGTTGACACAGGAAGTGGAACACCATTTATATCATCCATAGAATTGAGAACTTTGACAAATGATATTTATGTCACTGAATCTGGATCATTGGAAACTTACATCCGGTGGGATATGGGTTCAAACATCGGCTACAGGTACAAGGAAGATATTTATGATCGTTACTGGAGCTATGGCAACATCAATAACTGGACACAATTAAGTGTTTCGATTTCTTCTGCTGATGCTTTAGAGCAGAACGTATACCAACCGCCAGCAATTGTGATGAGCACTGCAGTTACACCATCAAATGATAGTGCTCCATTGGTAATAAACTGGATGCCAGATGATCCAACTGATAAATTCTATCTTTACATGTACTTCATGGAGATTCAAGAGTTAGGGACGAATCAGACAAGAGAATTCAACATCGTGGAAAATGGTATACAGAGGTATTCAAAGTTTTCACCCAAGAATCTAATTGCCACCACTTTATATAGCTCCTCAGCCTCCAGTGGGTCAGAAATTATATACTCTCTTCAAAAGACCAAAAACTCAACCCTGCCTCCCATCATCAATGCCCTTGAAATTTACAAAGCAATAGATTTCCCGCAATCAGAAACATTCAAAGGAGATGATGATGCCATTACAGCCATCAAATCAATTTATGGGGTCACAAGAGATTGGCAAGGTGATCCATGTGCCCCTGTAGATTACTTGTGGGATGGTTTGAATTGTAGTTATAACAAAAAAGAGTCTCCAAGAATCACAACTTTGAATTTATCTTCAAGTGGGTTGTCAGGAAAGATAGACCCTTCAATTGCAAACCTCAGCATGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAAACGGTGAAATTCCTGATTTTCTGTCTCAATTTCAACACTTAAAGATATTAAACTTGGAGAAGAATAACCTCTCTGGTTTAATTCCCACGGCACTTGTTGAAAAATCCAAGAAAGGTTCTCTGTCACTAAGTGTGGACCAAAATCCAAATCTCTGTGAATCTGGTCAATGCAACGTGCAGGATGAGGGAAAGGAAAAGGAAAAGAAAGAGAAAAACAACATTGTTGCACCCATAGTGGCAACCGTTAGTGGGGTTGTGATCCTTCTCATTGTCGTGGTAGCTGTAGTATGGATGGTTAAAAGGAGAAAATTGAAAGCTTTGATAGTTGAAAAGGATCAAAGTCAGATCTCACCACAATACACAGAACAAGATGATCTAGTGCTACCATTGAGAAAACAAATTTATTCCTACTCCGATGTCCTTAAAATCACCAACAATTTCAATACAACTCTGGGTAAAGGAGGATTTGGAACTGTTTATCTGGGCCATATCGATGAAACTCCAGTTGCAGTGAAAATGCTTTCCTCATCATCTGTCCAGGGTTTTCAACAATTTCAAGCAGAGGTTAAACTTCTAATGAGAGTTCATCACAAAAATTTAACCTCCCTCGTTGGTTATTGTAATGAAGAAACCAATAAGGGTCTCATATATGAGTACATGGCTAATGGAGACTTACAAGAACATCTCTCTGGTAAACACAGCAAAACAAAATTCTTCACCTGGGAAGAAAGACTTCGTATAGCAGTGGATGCAGCCTTAGGTTTGGAGTATCTGCAAAATGGTTGCAAGCCACCTATAATCCACAGAGACATAAAATCTACAAACATCTTGTTGAATGAACAATTCCAAGCAAAGTTAGCTGATTTTGGTCTATCCAAAATTATCCCAACTGAAGGTGGAACTCACGTGTCAACTGTTGTTGCCGGTACTCCTGGTTATCTGGACCCTGAGTACTTCATAACAAACAGATTGACAGAGAAGAGTGATGTTTTCAGTTTTGGTGTTGTTCTTTTGGAGATAATCACAAATCAACCAGTGATAATGAGAGGTGAAGAAAGTATTCACATAAGTGATTGGGTTAAATCCTTGGTTTTGAAAGGGGATATCAAAGCCATTGTTGACTCAAGGCTAGAAGGAGATTATGATACCAATTCAGTTTGGAAAGCAGTAGAAATAGCAACAGAATGTGTGTCTCCAAATATGAACAGAAGGCCTGTCACAAGCGTGATAGTGATTGAACTGAAGGAGTCTTTATCAATGGAAGTAGCTCGAAAAAAACACAGAGGCAACCCTTTAACACATTCAGGGGTCTCCATGAATCTGAATACCGAGTTTATTCCTCATGCCAGATAA 2679 0.3897 MGMLRCFLVGFVGALVLAALIQAQDQSGFISIDCGATADASFTESKTGINYTSDANLINTGVSMSIESDLKKQYQRYMWTLRSFPEGKRNCYKINITRGSKYLIKTGFLYGNYDGLNKLPKFDVHLGANRWSTVNINNGSINEVNEIIHVASLDYVQICLVDTGSGTPFISSIELRTLTNDIYVTESGSLETYIRWDMGSNIGYRYKEDIYDRYWSYGNINNWTQLSVSISSADALEQNVYQPPAIVMSTAVTPSNDSAPLVINWMPDDPTDKFYLYMYFMEIQELGTNQTREFNIVENGIQRYSKFSPKNLIATTLYSSSASSGSEIIYSLQKTKNSTLPPIINALEIYKAIDFPQSETFKGDDDAITAIKSIYGVTRDWQGDPCAPVDYLWDGLNCSYNKKESPRITTLNLSSSGLSGKIDPSIANLSMLEKLDLSNNSLNGEIPDFLSQFQHLKILNLEKNNLSGLIPTALVEKSKKGSLSLSVDQNPNLCESGQCNVQDEGKEKEKKEKNNIVAPIVATVSGVVILLIVVVAVVWMVKRRKLKALIVEKDQSQISPQYTEQDDLVLPLRKQIYSYSDVLKITNNFNTTLGKGGFGTVYLGHIDETPVAVKMLSSSSVQGFQQFQAEVKLLMRVHHKNLTSLVGYCNEETNKGLIYEYMANGDLQEHLSGKHSKTKFFTWEERLRIAVDAALGLEYLQNGCKPPIIHRDIKSTNILLNEQFQAKLADFGLSKIIPTEGGTHVSTVVAGTPGYLDPEYFITNRLTEKSDVFSFGVVLLEIITNQPVIMRGEESIHISDWVKSLVLKGDIKAIVDSRLEGDYDTNSVWKAVEIATECVSPNMNRRPVTSVIVIELKESLSMEVARKKHRGNPLTHSGVSMNLNTEFIPHAR* 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1670 892 Gene3D Phosphorylase Kinase; domain 1 574 661 - -
Pvu5g1670 892 Pfam Malectin-like domain 32 351 IPR024788 -
Pvu5g1670 892 SMART serkin_6 587 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1670 892 Pfam Protein tyrosine and serine/threonine kinase 589 852 IPR001245 GO:0004672|GO:0006468
Pvu5g1670 892 ProSitePatterns Serine/Threonine protein kinases active-site signature. 708 720 IPR008271 GO:0004672|GO:0006468
Pvu5g1670 892 Gene3D Transferase(Phosphotransferase) domain 1 662 876 - -
Pvu5g1670 892 PANTHER OS07G0107800 PROTEIN-RELATED 15 887 - -
Pvu5g1670 892 CDD STKc_IRAK 593 858 - -
Pvu5g1670 892 ProSitePatterns Protein kinases ATP-binding region signature. 593 614 IPR017441 GO:0005524
Pvu5g1670 892 SUPERFAMILY Protein kinase-like (PK-like) 567 852 IPR011009 -
Pvu5g1670 892 SUPERFAMILY L domain-like 379 474 - -
Pvu5g1670 892 Pfam Leucine Rich Repeat 432 451 IPR001611 GO:0005515
Pvu5g1670 892 ProSiteProfiles Protein kinase domain profile. 587 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1670 892 PANTHER PUTATIVE-RELATED 15 887 - -
Pvu5g1670 892 Gene3D Ribonuclease Inhibitor 367 490 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1670 Pvu-Chr5 38700489 38705124 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1670 1 892 Receptor kinase-like Gene Family AT1G51800 48.842 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1670 Malectin_like 7e-113 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1670 - - gmx:100785345 1301.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1670 5 38700489 38705124 Pvu5g1670 5 38700489 38705124 ECH
Pvu10g1488 10 41493409 41500189 Pvu5g1670 5 38700489 38705124 PCT