Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1669 ATGAATTCTTATCTCAACATTCTTCAATCTCGTGGATGTGCTTTTACTAGCCAACAACACAACCAAAAGGCTTCAACTTGGTCTATAACAAGTTTTCAGTTTACTTCACACAGTTTAGAAATGAAAGGATACTTTCTACTTCTCATTTTTCAACTCTCTTTAATTCTTCCTATCATTGTTCATGGCCGGAGTCAATCAGGATTCATCAGTGTTGACTGCGGACTTGTGGATGAACCAAGCTATACAGATGAAACTACTTCCATCTACTACTCTTCGGATGTCAACTTCACAGACAGTGGTGTAAGCCACAGCATATCACCTAAATATAAGGCTTCCCTTGAAAGGCAGTTCTGGAATGTTAGAAGCTTCCCAGTTGGAACCAGGCACTGCTATACCCTTGTTTCTCAAGGAAGTGGCAAGAAGTATTTAGTGAGGGCAAGGTTTGTATATGGAAGTTATGATGGAAAAGACTCTCTTCCCGAATTTGACATCTATCTTGGAGAAAAATGGTGGGGGTCAGTGGTGTTTGAGGATGCAGACAGTGTAGTCACCAAAGAAATCATTTATGCTGCTTCCTCAGATTATGTTCATGTTTGTTTATTCAACACTGGAAAGGGTACACCCTTTATTTCAGTTTTGGAGCTTAGAGTTCTTAACAGTGATGCCTATCTAGTCAACTATGTGGAACTCTTGGCACGGTTTGATGTAGGCTTAAAGGATGGTGAAATAGTGAGATTTCCAGATGATGTCTATGATAGAATATGGACACCTTACAACTCAAATGACTGGAAACAGATTGATACCCTCCTTACCATAGACCAAGGTGCTACTTCATATAACTTTTTACCATTGCCACCCTCCAATGTCATGGGAACAGCAGCAATTCCAGCAAATGTCAAGGACAATATAGAGTTCCACTTCCTTCCCAATTATAATTCTTCCACTCTTTATGTGTACATGTTTTTTGCTGAAATCCAGAAGCTTCAGGCAAACCAAACGAGAGAGTTCAACATTTTTGTAAATGGGGACATTTTAAATAATTATCCAATCAATCCTTTATACCTGCAGAGTGTGTATCACATAGCTCTAACTGAAAAACCGTTGGACATTTGGATTAATAAAACTAGTAGATCAACTCTTCCACCTCTTCTCAACGCCATTGAGATATATACCACAAGAAACCTCTCACAATCTGCAACATATCAAACAGATGTTGATGGTATAATAAATGTCAAGTCAATGTATGGAATCAAGAGAAACTGGCAAGGAGATCCTTGTATACCAGTAGCTTACTTGTGGGACGGTCTTAACTGCAGCTATGAATCTGGTTCAGCAAGAATTATATACTTGAACTTATCTTCCAGTGGTTTAATTGGTAATATAGCATCTGGCATATCCAATCTGCAGTACATAGAATATTTGGATTTGTCAAACAACAATTTGACCGGGGTCGTGCCTGAATTCCTACATCAACTAAGCTTCTTAAGAGTTCTAAACCTAGAAGGCAATCAGCTATCAGGAACAATTCCAACGCAACTCATTGTACTTTCCCAGAACGGTTTACTTGAATCCAATTTTGGTGGAAATCCAAATCTTTGCTCCCCAGGTTCATGCAACAATAAAAATGGGAACAGAGTTGTAATCCCACTAGTGGCATCGCTCGGTGGAGCTTTCGTGATACTAGTAATAATACTGATTTCTTTCTACATACACAAAAGGAGACAACCAGTTTCAGCTAGCAAACGGATTGGCTATTCCAGAATAAAGGAGGAACTAGAGACAAATAAACAAGAATTTACCTATGCTGAAGTCCTGAGCATGACCAAAAATTTTGAAAGAGTTGTAGGGAAAGGAGGATTTGCTACAGTCTACCATGGCTGCATAGATGATATTGAGGTAGCTGTCAAAATGCTCTCTCCCTCAGCCCAAGGGTATCTGCAGTTTAAGGCTGAGGCCAAATTTGTTGCTGTTGTTCATCATAAATTTTTAACTTCTCTAATTGGATATTGTGATGATGGCGAGAATATGGCTCTCATCTATGAGTATATGGCTAATGGAGACTTGGCAAAACATTTATCAGGCAAAAGCAAAAATATATTGAGTTGGAACCAACGACTTCAAATTGCAGTGGATGCTGCCGAAGGATTGGAGTATTTGCATCATGGCTGCAATGTACCAATTGTTCACAGAGATGTTAAGTCTAAGAACATCTTGGTGAATGAAAAATTGCGGGGTAAACTAGCTGATTTTGGGTTGTCAAAGATCTATCCTGATGAAAGCGACACCCATATGACCACAGTGGTAGCTGGCACCCTGGGATATCTTGATCCAGAGTACAATAGATCAAACAGGTTGAATGGAAAAAGTGATGTTTTCAGTTTTGGAGTAGTGCTGCTTGAGATAATTACAGGTCAACCAGCTATAACCAGATCTGAGGAGAAAACTCACATAGTTCAATGGGTTCATTCTGTGCTACTTGAAAAGGAGATCAATGATATTGTAGATTCAAGATTGCAGGGAGAATTTGACATTGATTCTGTAAAGAAGGTCTTAGACACTGCAATGGCTTGTGTAGCAGCCACTTCAATTCATAGGCCAACCATGAATCATGTAGTGAATGAACTGAAACAATGTTTTTCAAACAAGATGACTCCTCCCTTTGACTCTGATGATCTTGAGAGTTCATCCAACAGCTCAATCATTGTCTCCTTTGATGGAATTAGTGGAGAGAGCTCTCTAGAGAGATAG 2748 0.393 MNSYLNILQSRGCAFTSQQHNQKASTWSITSFQFTSHSLEMKGYFLLLIFQLSLILPIIVHGRSQSGFISVDCGLVDEPSYTDETTSIYYSSDVNFTDSGVSHSISPKYKASLERQFWNVRSFPVGTRHCYTLVSQGSGKKYLVRARFVYGSYDGKDSLPEFDIYLGEKWWGSVVFEDADSVVTKEIIYAASSDYVHVCLFNTGKGTPFISVLELRVLNSDAYLVNYVELLARFDVGLKDGEIVRFPDDVYDRIWTPYNSNDWKQIDTLLTIDQGATSYNFLPLPPSNVMGTAAIPANVKDNIEFHFLPNYNSSTLYVYMFFAEIQKLQANQTREFNIFVNGDILNNYPINPLYLQSVYHIALTEKPLDIWINKTSRSTLPPLLNAIEIYTTRNLSQSATYQTDVDGIINVKSMYGIKRNWQGDPCIPVAYLWDGLNCSYESGSARIIYLNLSSSGLIGNIASGISNLQYIEYLDLSNNNLTGVVPEFLHQLSFLRVLNLEGNQLSGTIPTQLIVLSQNGLLESNFGGNPNLCSPGSCNNKNGNRVVIPLVASLGGAFVILVIILISFYIHKRRQPVSASKRIGYSRIKEELETNKQEFTYAEVLSMTKNFERVVGKGGFATVYHGCIDDIEVAVKMLSPSAQGYLQFKAEAKFVAVVHHKFLTSLIGYCDDGENMALIYEYMANGDLAKHLSGKSKNILSWNQRLQIAVDAAEGLEYLHHGCNVPIVHRDVKSKNILVNEKLRGKLADFGLSKIYPDESDTHMTTVVAGTLGYLDPEYNRSNRLNGKSDVFSFGVVLLEIITGQPAITRSEEKTHIVQWVHSVLLEKEINDIVDSRLQGEFDIDSVKKVLDTAMACVAATSIHRPTMNHVVNELKQCFSNKMTPPFDSDDLESSSNSSIIVSFDGISGESSLER* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1669 915 Gene3D Ribonuclease Inhibitor 409 525 IPR032675 -
Pvu5g1669 915 ProSiteProfiles Protein kinase domain profile. 609 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1669 915 Gene3D Transferase(Phosphotransferase) domain 1 683 895 - -
Pvu5g1669 915 Pfam Malectin-like domain 71 391 IPR024788 -
Pvu5g1669 915 Pfam Leucine rich repeat 450 505 IPR001611 GO:0005515
Pvu5g1669 915 PANTHER TYROSINE KINASE FAMILY PROTEIN 50 915 - -
Pvu5g1669 915 Pfam Protein tyrosine and serine/threonine kinase 611 875 IPR001245 GO:0004672|GO:0006468
Pvu5g1669 915 ProSitePatterns Protein kinases ATP-binding region signature. 615 636 IPR017441 GO:0005524
Pvu5g1669 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 727 739 IPR008271 GO:0004672|GO:0006468
Pvu5g1669 915 SUPERFAMILY L domain-like 430 532 - -
Pvu5g1669 915 Gene3D Phosphorylase Kinase; domain 1 591 682 - -
Pvu5g1669 915 PANTHER OS07G0107800 PROTEIN-RELATED 50 915 - -
Pvu5g1669 915 SUPERFAMILY Protein kinase-like (PK-like) 593 875 IPR011009 -
Pvu5g1669 915 SMART serkin_6 609 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1669 Pvu-Chr5 38693788 38698970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1669 44 880 Receptor kinase-like Gene Family AT2G19210 47.251 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Pvu5g1669 Malectin_like 1.9e-97 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1669 - - pvu:PHAVU_005G162000g 1815.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1669 5 38693788 38698970 Pvu10g1488 10 41493409 41500189 PCT