Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1655 ATGAGTCGAGAACAGCAGAAGCGAGGAAAGCAAGAAATATGTTCTGATGACGCGGAAAAGGTCATTGTTGCCGTTAAGGCATCAAAGGAAATTCCAAAAACTGCTCTTGTTTGGTCCCTAACTCATGTTGTGCAACCTGGTGATTGCATTACACTGCTAGTGGTTGTACCTTCACAGAGTTCGGGCAGAAGATTATGGGGTTTTCCAAGATTTTCCGGTGATTGTGCGAGTGGTCATAAGAAATCTTCTTCGGGATCATCAAGTTCAGAACAGAAGTGTGATATCACTGACTCTTGCTCTCAAATGATCCTTCAACTCCATGATGTCTATGATCCTAACAAGATAAATGTGAAGATTAAAATTGTTTCTGGATCACCCTGTGGAGCAGTGGCTGCGGAAGCCAAGAAAGCCCAAGCCAATTGGGTAGTTTTAGACAAACAGCTCAAACATGAGGAAAAACAATGTATGGAAGAGCTGCAGTGCAACATTGTGGTTATGAAGCGTTCGCAACCTAAGGTACTCCGCTTGAATTTGGTTGGAAAAAAAAAGAAGGATCTTGAAGAATTATGTTCACTACCTTCTGAACAAGATCAGTTGCTTGGAAAACAAACTAAGAACAAGAATGATTCTTTAAATTCCTTAAAAGGTCCAGTTGTCACTCCATCTAGCAGCCCTGAGCTAGGGACACCGTTCACTGCAACTGAAGCTGGTACTTCGTCGGTTTCAAGCTCTGATCAAGGAACTTCGCCATTTTTCATCTCTGAGATAAACAGTGAGTCCAAAAAAGAGGAAACTATCAAAGAAAATCCAGAACTTGATGATTCTATATCAGACACAGACAGTGAAAACTTGTCCACTTCTTCAGCAAGCTTGAGATTCCAGCCATGGATCACTGATTTACTTCTGCATCAACGATCATCTCAACCTAAGGAAGAAAGAACCGAGAGATGTCATAATAGGACTCAATTGTCTACTACTAGAGCTTTGCTAGAAAAGTTCTCGAGACTTGATAGAGAAGCTGAAATTGAAATCTCAACCTATAAGACTGACTTAGATTTCAGTGGGAGTGTACGAGAAGCAATATCATTATCTAGAAATAATCCACCTGGTCCACCTCCCTTGTGTTCAGTCTGTCAACACAAGGCTCCTGTTTTTGGAAAACCTCCCCGATGGTTCAGCTATGCTGAATTGGAGCTTGCCACTGGTGGGTTTTCACAAGCCAATTTCTTGGCAGAAGGAGGATTTGGATCTGTTCATAGAGGGGTTCTACCAGATGGACAAGTTGTTGCTGTGAAGCAACATAAATTGGCTAGTTCTCAGGGTGATCTTGAATTCTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTTGTTATGTTGATTGGTTTCTGTATAGAGGATAAGAGAAGGCTATTGGTTTATGAGTACATATGCAATGGATCATTGGATTCTCATTTATATGGGAGACAACGAAAACCATTAGAATGGTCTGCCCGGCAAAAAGTTGCTGTTGGAGCTGCCCGAGGGTTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGTGACATGCGGCCAAACAACATTCTTATCACTCATGATTTTGAACCACTGGTTGGTGATTTTGGACTGGCGAGGTGGCAGCCTGATGGTGACACTGGAGTGGAAACAAGAGTAATCGGAACATTTGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATTACTGAAAAGGCTGATGTTTATTCATTTGGTGTGGTATTAGTGGAACTTGTTACAGGGCGAAAGGCTGTGGATCTCAATAGGCCAAAGGGACAGCAGTGTCTTACTGAGTGGGCACGACCACTGTTAGAAGAATATGCCATTGACGAACTGATTGATCCAAGGTTGGGAAGTCACTATTCGGAGCATGAGGTCTATTGCATGCTGCATGCTGCCTCATTGTGCATAAGGAAAGATCCTTATTCTAGACCACGCATGTCTCAGGTTCTGCGAATACTGGATGGTGACACGGTTATGGACCCAAATTATGTTTCAACTCCCAGTTATGATGTAGGAAACCGGAGTGGCTGA 2094 0.4312 MSREQQKRGKQEICSDDAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFSGDCASGHKKSSSGSSSSEQKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPCGAVAAEAKKAQANWVVLDKQLKHEEKQCMEELQCNIVVMKRSQPKVLRLNLVGKKKKDLEELCSLPSEQDQLLGKQTKNKNDSLNSLKGPVVTPSSSPELGTPFTATEAGTSSVSSSDQGTSPFFISEINSESKKEETIKENPELDDSISDTDSENLSTSSASLRFQPWITDLLLHQRSSQPKEERTERCHNRTQLSTTRALLEKFSRLDREAEIEISTYKTDLDFSGSVREAISLSRNNPPGPPPLCSVCQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRKPLEWSARQKVAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIDELIDPRLGSHYSEHEVYCMLHAASLCIRKDPYSRPRMSQVLRILDGDTVMDPNYVSTPSYDVGNRSG* 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1655 697 MobiDBLite consensus disorder prediction 200 283 - -
Pvu5g1655 697 SUPERFAMILY Protein kinase-like (PK-like) 388 683 IPR011009 -
Pvu5g1655 697 Gene3D Phosphorylase Kinase; domain 1 375 479 - -
Pvu5g1655 697 MobiDBLite consensus disorder prediction 200 256 - -
Pvu5g1655 697 CDD STKc_IRAK 410 676 - -
Pvu5g1655 697 ProSitePatterns Tyrosine protein kinases specific active-site signature. 525 537 IPR008266 GO:0004672|GO:0006468
Pvu5g1655 697 Gene3D Transferase(Phosphotransferase) domain 1 480 684 - -
Pvu5g1655 697 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 16 695 - -
Pvu5g1655 697 PANTHER OS01G0253100 PROTEIN 16 695 IPR045271 GO:0004714|GO:0006468
Pvu5g1655 697 MobiDBLite consensus disorder prediction 257 274 - -
Pvu5g1655 697 Pfam Protein tyrosine and serine/threonine kinase 408 673 IPR001245 GO:0004672|GO:0006468
Pvu5g1655 697 ProSiteProfiles Protein kinase domain profile. 404 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1655 Pvu-Chr5 38589450 38595744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1655 391 675 Trihelix Transcription Factor Family AT5G38560 53.952 8.26e-103 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pvu5g1655 PK_Tyr_Ser-Thr 4.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1655 - - gmx:100789216 1288.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1655 5 38589450 38595744 Pvu10g1455 10 41208142 41213337 PCT