Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1640 ATGGGGTTGAAGCTTATTTTCCTGATAATTAAGCTACATTTTGTTATATGTACACCCCAGCTTCATGAATATACTGCCAGTTATTTGCACCATTCGAGAATCCGAAGCCCTTCAAGCATTGCATCCCCACCTACAGAGTCACCTACTGGAGTTCCTGCTAGTACTACTGCACTTCCACCTTCCAAGGCATCTTCTAGAATTCCCAGAAGTATTGAACTTTCACCTTCCCAATCATTCACCAAAAGGAAATGGATGCACAGTTCCATGGACTCTCCAATTCCACACCACAAGCATCACCATTCCAGAAGAAAGTTCAGCAACCAAGCTCCTGGACCAACCTTTCCAATCAACCCTCATACTCAACAAGGTCCTCCTCCTGTCTTCAAATCACAACATTCATTCTCTTCACCTATGAGCCGGGATTTACATGCACCTGCACCAGCACCAATAGTTCTATCACACCACTTGAATGTGCCCTCTACTTCACCTAGAATTTCACCTCTAGGTTCATCAGTGAAGAAGACAAGGACTCCACCACCAGCATACGCTTTGGTTCTACCATCTCCACCGCCTAACAAAGATTGTATGTCTCTGACATGCTCTGAGCCCTTGACATATACACTTCCTGGATCACCTTGTGGTTGTGTTTGGCCACTCCAAGTTAAACTTTGCATCAGCATTGCAATATACAAGTTTTTTCCTTTGGTTTCCAAGCTGGCCAAAGAAATTGCAGCTAGTGTTTTGCTGAACCATAATCAAGTACGCATTGTGGGAGCCGATGCAACTATTCAGCAGCTTGAGAAAACCACTGTTCTCATAAACTTGGTACCCCAAGGAGTGAAATTTGATGATACAACAGCTTTTTTAATATATAAGAAATTCTGGCAGAGAGAGATTCTCAATGATGCTTCTACCTTTGGTGCCTATGAAGTGCTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCTTCAAATGTTGACGGTATAGATGTTGAACCATACCCCAGTCACGACAACAATGGAACAATGATGAAACCTCTAGGAGTAGATATCTCAAGGAAGCAAAAAGAAGGGAGTGGTGGAAGAGTGGTTATTATGATCATCCTGTCATCTTTTACTGCCTTCTTTCTATTCATTGGATTTGTATGGTTTTTTCTAACGAAATGCGGTTCCTGCACTCTTGAACCTGAACATATTCCAGATGCCAAAATTCCATCCACTTCAAAGCGATCAGGTACTGCCAGTGCTAGGTCATTGATTTATGCGAGCATGCCAGGTTCTAGATCAATGTCCTTCAGTTCTGGAACATTGATCCATGCAGGATCAGTTAAAATATTTACTTTGAACGAAATCGAGAAAGCAACAAATAACTTCAATTCTTCGAGCATACTAGGAAAAGGTGGCTTTGGTCTTGTTTATAAAGGTGACTTAAATGATGGCAGAGAGGTGGCTGTGAAGATTCTCAAAAGGGATGACCAGCATGGTGACCATGAATTCTTTGCAGAATCAGAGATGCTTAGCTGCTTGCACCATAGGAATTTAGTTAAACTGATAGGTATATGCACAGAAAAACAGAATCGCTGCTTAGTCTATGAGCTTGTCCCTAATGGCAGCGTGGAATCCCACTTACATGGTGTTGACAAGGAAACAGAACCACTTGATTGGAATACCCGGATGAAGATTGCACTTGGTGCAGCTAGAGGATTAGCCTACCTTCATGAAGATTGTAATCCATGTGTCATACACAGGGACTTCAAATCCAGCAACATCTTACTGGAATATGATTTTATACCCAAAGTTTCAGATTTTGGCTTGGCCAGAACAACATTGAAGGAGGGAAACAAGCCCATCTCAACACATGTTATTGGAACATTTGGCTACGTAGCTCCTGAATATGCAATGACGGGACATCTTCTTGTCAAAAGTGATGTTTACAGCTATGGAGTTGTTCTCCTTGAGCTTCTAAGTGGAAGAAAGCCTGTGGATTTGTCGCAGCCACCAGGTCAAGAAAACCTTGTTGCTTGGGCTCGTCCACTTCTTACAAGCAAGGAGGGTTTGCAGAAGATCATAGACCCAGTTATGAAGCCTAGTGTTTCTGTTGATACCATTGTAAAGGTTGCAGCAATTGCATCCATGTGCGTGCAACCAGAAGTCACACAGCGTCCTTTTATGGGTGAAGTTGTTCAGGCCTTGACACTGGTATGCAGTGAGTTTGAGGAAACAAGAGTTCTGTAA 2238 0.4267 MGLKLIFLIIKLHFVICTPQLHEYTASYLHHSRIRSPSSIASPPTESPTGVPASTTALPPSKASSRIPRSIELSPSQSFTKRKWMHSSMDSPIPHHKHHHSRRKFSNQAPGPTFPINPHTQQGPPPVFKSQHSFSSPMSRDLHAPAPAPIVLSHHLNVPSTSPRISPLGSSVKKTRTPPPAYALVLPSPPPNKDCMSLTCSEPLTYTLPGSPCGCVWPLQVKLCISIAIYKFFPLVSKLAKEIAASVLLNHNQVRIVGADATIQQLEKTTVLINLVPQGVKFDDTTAFLIYKKFWQREILNDASTFGAYEVLYVHYPGLPPSPPSNVDGIDVEPYPSHDNNGTMMKPLGVDISRKQKEGSGGRVVIMIILSSFTAFFLFIGFVWFFLTKCGSCTLEPEHIPDAKIPSTSKRSGTASARSLIYASMPGSRSMSFSSGTLIHAGSVKIFTLNEIEKATNNFNSSSILGKGGFGLVYKGDLNDGREVAVKILKRDDQHGDHEFFAESEMLSCLHHRNLVKLIGICTEKQNRCLVYELVPNGSVESHLHGVDKETEPLDWNTRMKIALGAARGLAYLHEDCNPCVIHRDFKSSNILLEYDFIPKVSDFGLARTTLKEGNKPISTHVIGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLSGRKPVDLSQPPGQENLVAWARPLLTSKEGLQKIIDPVMKPSVSVDTIVKVAAIASMCVQPEVTQRPFMGEVVQALTLVCSEFEETRVL* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1640 745 Gene3D Phosphorylase Kinase; domain 1 431 534 - -
Pvu5g1640 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Pvu5g1640 745 MobiDBLite consensus disorder prediction 36 85 - -
Pvu5g1640 745 ProSiteProfiles Protein kinase domain profile. 459 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1640 745 ProSitePatterns Protein kinases ATP-binding region signature. 465 487 IPR017441 GO:0005524
Pvu5g1640 745 Gene3D Transferase(Phosphotransferase) domain 1 535 743 - -
Pvu5g1640 745 PANTHER OS01G0750732 PROTEIN 7 743 - -
Pvu5g1640 745 PANTHER OS01G0750732 PROTEIN 7 743 - -
Pvu5g1640 745 CDD STKc_IRAK 465 733 - -
Pvu5g1640 745 MobiDBLite consensus disorder prediction 36 141 - -
Pvu5g1640 745 SUPERFAMILY Protein kinase-like (PK-like) 439 733 IPR011009 -
Pvu5g1640 745 Pfam Protein tyrosine and serine/threonine kinase 462 732 IPR001245 GO:0004672|GO:0006468
Pvu5g1640 745 MobiDBLite consensus disorder prediction 123 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1640 Pvu-Chr5 38474228 38479812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1640 97 745 Receptor kinase-like Gene Family AT5G56890 56.721 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Pvu5g1640 PK_Tyr_Ser-Thr 1.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1640 - - gmx:100798578 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1640 5 38474228 38479812 Pvu10g1442 10 41090089 41096321 PCT