Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1637 ATGGCAAGCAACCAAGTAAAAGACGCACCCAAAAGGCTCCAATACCCACTCGACTCTTCCTCCTACAAGCTCCTCCACGAGATCGGCGCCGGCGTGAGCGCCGTCGTGTACAAAGCCATCTGCATCCCCATGAACTCCGCCGTGGTGGCAATCAAATCCATAGACCTGGACCGTTCCCGCCCCGACCTGGACGACGTTCGCCGCGAGGCCAAAACCCTCTCCCTCCTCTCTCACCCCAACATCCTCAAAGCCCACTGCTCCTTCACCGTCGACCGCCGCCTCTGGGTGGTGATGCCCTTCATGGCCGCAGGATCTCTCCAATCCATCATCTCTCACTCCCACCCCAACGGCCTAACCGAACCCTGCATCGCGGTGGTTCTCCGAGACACCCTCAACGCCCTCTCCTACCTCCACGGCCAGGGCCACCTCCACCGCGACATAAAAGCCGGGAACATCCTCGTTGACACAAACGGACAAGTGAAGCTGGCGGATTTCGGCGTGTCGGCGTCGATCTACGAGTCCTCCACGTGCTCATCTCTGAAGCTGACCGACGTCGCCGGCACGCCGTATTGGATGGCTCCGGAGGTGATTCACTCGCACACGGGGTACAGTTTGAAGGCTGACATATGGTCCTTTGGGATAACTGCATTGGAGCTGGCGCATGGAAGGCCTCCTCTCTCTCACCTTCCACCTTCCAAGTCCATGATGCTCAAGATCACGAAACGCTTTCGTTTCTCCGATTTGGATAAGTACAGAAAGGGGAACGGGAACAAGTTCTCGAAGGCGTTCAGGGACATGGTGGCTTCTTGTCTGGACCAAGATCCTTCCAGAAGGCCCTCTGCTGATAAGTTGCTGAAACACGCCTTTTTTAAAAACTGCAAGGGAAGTGATTTTGTGGTGAAGAACGTGCTCCAAGGGTTGCCCAGTGTGGAGAAAAGGTACAAGGAGAGCAAGGTTGTTGAGCATGATAATGATGATGATGATGATGACCCCGCCATGCAGGTGAAGGAGAGAAGGATCAGTGGGTGGAACTTCAACCAAGAGGGGTTGGAGTTTGATCCTGTGTTTCCAAACGATGATGCGGGGGCTAAAGAGGTTGTTGGGTTTGGAGGAGAAAGAGTTATGGAGGAGCATGTTAATGGTGGTGGTGGTGGTGTGAAGAGGGAAAAGGTGTTAGCGACTCTGAATGTGCTGAAAGGGAGCTTGGAACAAGAGCTGTTGGAAGTGAAGTTTCTGGTGAATATGATAGGAGGAGAAGAGGAGAGTGATGATAGAGAGGAGAAGGAGATTTCAAGGATGAGAGCTGCATTGGAAAATGAGAGGAAGAAGAACTTGCAGTTGGAGTTGCAGCTCCACACCTACAAGCTTCGTCTTTCTTCTCCTCTCAATGTTTAA 1395 0.5326 MASNQVKDAPKRLQYPLDSSSYKLLHEIGAGVSAVVYKAICIPMNSAVVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTVDRRLWVVMPFMAAGSLQSIISHSHPNGLTEPCIAVVLRDTLNALSYLHGQGHLHRDIKAGNILVDTNGQVKLADFGVSASIYESSTCSSLKLTDVAGTPYWMAPEVIHSHTGYSLKADIWSFGITALELAHGRPPLSHLPPSKSMMLKITKRFRFSDLDKYRKGNGNKFSKAFRDMVASCLDQDPSRRPSADKLLKHAFFKNCKGSDFVVKNVLQGLPSVEKRYKESKVVEHDNDDDDDDPAMQVKERRISGWNFNQEGLEFDPVFPNDDAGAKEVVGFGGERVMEEHVNGGGGGVKREKVLATLNVLKGSLEQELLEVKFLVNMIGGEEESDDREEKEISRMRAALENERKKNLQLELQLHTYKLRLSSPLNV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1637 464 Gene3D Phosphorylase Kinase; domain 1 11 100 - -
Pvu5g1637 464 Coils Coil 423 457 - -
Pvu5g1637 464 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 5 455 - -
Pvu5g1637 464 PANTHER SERINE/THREONINE-PROTEIN KINASE BLUS1 5 455 - -
Pvu5g1637 464 Gene3D Transferase(Phosphotransferase) domain 1 104 340 - -
Pvu5g1637 464 ProSiteProfiles Protein kinase domain profile. 22 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1637 464 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
Pvu5g1637 464 Pfam Protein kinase domain 22 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1637 464 SUPERFAMILY Protein kinase-like (PK-like) 20 309 IPR011009 -
Pvu5g1637 464 SMART serkin_6 22 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1637 Pvu-Chr5 38450213 38451607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1637 9 446 MAP Kinase Kinase Kinase Kinase AT4G14480 55.950 0.0 515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pvu5g1637 Pkinase 1.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1637 K08835 - gmx:100820227 725.702