Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1622 ATGGCACGGGGGAGGATCAGGTCGAGGCTCCGTCGGAGCCATCTTTACACATTTGGTTGCCTGAAGCCAACTACCACTGAGGAGGTGCCTCATCCACTTCAAGGTCCTGGCTACTCGCGAACAGTCTTCTGCAACCAGCCTCAGCTCCATGAAAAAAATTCTCTATTTTACTGCAAGAATGATATATCAACCACCAAGTACAATGTCATCACCTTCATGCCCAAGGCATTGTTTGAACAGTTTCGAAGGGTTGCTAACATATACTTTCTTTTGGCCGCTTGCCTTTCGGCTTCTCCAATTTCTCCTTTCAGCCCACTGAGCATGATTGCTCCTCTGGCGTTTGTTGTGGGACTTAGTATGGTGAAGGAGGCATTGGAGGATTTTCGCAGGTTCCTTCAGGATGTCAAAGTCAATCGACGGAAAGTTACTCTCCATATAGGCAATGGCACTTTTGGCCTAAGATCGTGGCAAAAGATTGTGGTTGGGGATGTGGTAAAGGTAGAAAAGGATCAATTTTTTCCAGCCGACCTGCTTCTCTTGGCGTCAAGTTACGAGGATGGAATATGCTATGTCGAGACAATGAATTTAGATGGGGAGACCAACTTGAAGGTGAAGAGATCTTTGGAGTCTACCTTGTCCCTGGATAACGATAAGGCTTTTAAGGATTTCTGTGGAACAATATATTGTGAAGATCCAAATCCCAATCTTTATACTTTTATTGGGAACTTTGAGTATGAAAATCAGGTTTATCCTCTTGATCCTAGTCAAATTCTCCTCAGAGATTCGAAGCTTAGAAACACCGATCATGTTTATGGAGTGGTCATTTTCTCTGGACATGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAAAGAAGCACAATAGAAAAGAAGATGGATTATATCATATATACTCTTTTCACTGTCCTTATATTGATATCTTTTATCAGTTCGATAGGATTTGTTGCAAAGACCAAATACCAAGCCCCATCGTGGTGGTATTTACGGCCTGACAATATTGAATACCAGTTTGATCCTGGGAAAATTGGATTGGCTGGGATGAGCCATCTGATTACAGCACTCATTCTCTATGGATATTTGATTCCTATCTCGCTTTATGTTTCTATTGAGGTTGTGAAGGTGTTACAGGCAACCTTCATTGACCAAGATATTCAAATGTATGATGATGAGACTGGAACTCCAGCTAATGCACGGACATCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACCATCCTCTCTGATAAAACTGGCACTTTAACTTGCAACCAGATGGACTTTTTGAAGTGCTCCATTGCCGGTACCGCATATGGTGTTCGTTCCAGTGAGGTTGAACTTGCTGCAGCAAAGCAAATGGCTTGTGATCTTGAGGAGCCGGACTTGGATATGTCTAATTTCCCCATGCGTAAGGAGACTAAAGGGCCATGGGAAAATATCACTGAAGATGTAGAATCTGAACTGGGGACTGTTGTTAATTCCAAAGGTGATGAAGATCGAAGGACTTCCATAAAGGGATTTGGTTTTGAAGATGATCGCCTTATGAATGGTAACTGGATGAAAGAACCCAATGCGGATGTCCTTTTGATGTTTTTCCGGATATTAGCAATTTGCCATACTGCCATCCCTGAACTAAATGAGGAGACTGACAATTGTACCTATGAGGCCGAGTCACCTGATGAAGGGGCTTTTCTAGTAGCAGCTAGAGAATTTGGTTTTGAATTTTATAGGAGAACTCAATCAAGTGTTGTCATTCGTGAAAGATTTGCTGCCTCAGGACAAGTGGTTCAAAGAGAATATAAAATTTTGAATCTGCTGGATTTTACTAGCAAAAGAAAGCGCATGTCAGTGATTGCACGAGACGAGGAGGGAAACATCATTCTTTTTTGCAAAGGAGCTGACAGTATCATATTTGATAGACTGTCTAAGAATGGAAAAATGTATTTGGACGCTACTACTAGACATTTGAATGAATATGGAGAAGCTGGTTTGAGAACACTAGCCGTGGCCTATAGAGAGCTTGATGACCAAGAGTACACTGATTGGAATAAGGAGTTTCAGAAGGCCAAAACAGCTGTTGGGCCTGACAGAGAGGCAATGCTTGATCAGGTTTCAGATGTTATGGAAAGGGAGTTGATACTTATTGGCGCTACTGCTGTGGAGGATAAACTACAGAAAGGGGTGCCTCAATGCATTGACAAACTTGCTCAAGCTGGTCTAAAGATCTGGGTATTGACTGGGGATAAGATGGAAACTGCAATCAACATTGGATTTGCTTGTAGTTTGCTTCGACAGGGCATGAGGCAAATCTGTATCACAATGAATTCAGATTCTGCAACTTATGACGCGAAAGAGGTCATCAAAGGAAACATCTTGAATCAAATCACCAATGCCTCGCAAATGATAAAGCTGGACAAGGATCCACATGCTGCGTTTGCATTAATTATCGATGGGAAAACTCTAACATATGCTTTAGAAGATGATGTCAAACTCCAATTTTTGGGACTGGCTGTTGGTTGTGCATCTGTTATTTGTTGTCGTGTGTCTCCAAAGCAAAAAGCATTGGTTACAAGGCTAGTGAAAGAAGGAACTGGGAAGACCACTTTAGCCATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGTGGGGTTGAAGGTATGCAGGCAGTAATGGCCAGTGACTTTTCTATTGCCCAATTCCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGATATGTTATTTCTTCTACAAAAATATAGCATTTGGCCTCACCATTTTCTACTTTGAGGCCTTTGCGGGCTTCTCTGGACAATCGATTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTGCCTGTCATTTCTCTTGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTGTATCAGCAAGGACCCAAAAACTTGTTCTTTGACTGGTATAGAATCTTGGGATGGATGGGGAATGGTCTTTATTCCTCCCTCGTCATCTTCTTCCTTGTCATTATCATCTTCTATGACCAAGCATTCCGTGTCAATGGCCAGATCGCAGACATGGCTGCTGTTGGTACCACGATGTTCACTTGCATCATATGGGCTGTCAATTGCCAGATTGCACTGACAATGAGCCATTTCACATGGATTCAACACCTCTTTGTGTGGGGCAGCATAACCACTTGGTACCTGTTTCTCTTGTTATATGGCATGCTTCCACCAAAATATTGCAAGAATGCCTACAAAATATTGGTGGAGGTTCTTGCTCCTGCTCCTATTTATTGGACAACAACCCTATTAGTAACAATCACATGCGTTCTTCCTTATCTCGCCCACATATCCTTCCAAAGATGTTTTCATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGACATTGAAGATCAACACATGTGGACGAGGGAGCGGTCTAAAGCAAGGCACGAAACGAAGATTGGATTCACGGCAAGAGTGGAAGCAAAGATTAGGCATTTTAGAGGTAAGTTGCAGAAAAAGCAGCAGTCTTCAGTGGGGTCTTTGTCCCCATCATGA 3672 0.4227 MARGRIRSRLRRSHLYTFGCLKPTTTEEVPHPLQGPGYSRTVFCNQPQLHEKNSLFYCKNDISTTKYNVITFMPKALFEQFRRVANIYFLLAACLSASPISPFSPLSMIAPLAFVVGLSMVKEALEDFRRFLQDVKVNRRKVTLHIGNGTFGLRSWQKIVVGDVVKVEKDQFFPADLLLLASSYEDGICYVETMNLDGETNLKVKRSLESTLSLDNDKAFKDFCGTIYCEDPNPNLYTFIGNFEYENQVYPLDPSQILLRDSKLRNTDHVYGVVIFSGHDSKVMQNSTKSPSKRSTIEKKMDYIIYTLFTVLILISFISSIGFVAKTKYQAPSWWYLRPDNIEYQFDPGKIGLAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFIDQDIQMYDDETGTPANARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVRSSEVELAAAKQMACDLEEPDLDMSNFPMRKETKGPWENITEDVESELGTVVNSKGDEDRRTSIKGFGFEDDRLMNGNWMKEPNADVLLMFFRILAICHTAIPELNEETDNCTYEAESPDEGAFLVAAREFGFEFYRRTQSSVVIRERFAASGQVVQREYKILNLLDFTSKRKRMSVIARDEEGNIILFCKGADSIIFDRLSKNGKMYLDATTRHLNEYGEAGLRTLAVAYRELDDQEYTDWNKEFQKAKTAVGPDREAMLDQVSDVMERELILIGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMRQICITMNSDSATYDAKEVIKGNILNQITNASQMIKLDKDPHAAFALIIDGKTLTYALEDDVKLQFLGLAVGCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSIYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLVIFFLVIIIFYDQAFRVNGQIADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSITTWYLFLLLYGMLPPKYCKNAYKILVEVLAPAPIYWTTTLLVTITCVLPYLAHISFQRCFHPMDHHIIQEIKYYKKDIEDQHMWTRERSKARHETKIGFTARVEAKIRHFRGKLQKKQQSSVGSLSPS* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1622 1223 PRINTS P-type cation-transporting ATPase superfamily signature 422 436 - -
Pvu5g1622 1223 PRINTS P-type cation-transporting ATPase superfamily signature 879 898 - -
Pvu5g1622 1223 SUPERFAMILY Calcium ATPase, transduction domain A 144 286 IPR008250 -
Pvu5g1622 1223 Gene3D - 121 288 - -
Pvu5g1622 1223 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1165 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Pvu5g1622 1223 Pfam Phospholipid-translocating P-type ATPase C-terminal 907 1157 IPR032630 -
Pvu5g1622 1223 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 522 685 IPR023299 GO:0000166
Pvu5g1622 1223 Pfam Phospholipid-translocating ATPase N-terminal 42 109 IPR032631 -
Pvu5g1622 1223 Gene3D - 419 431 IPR023214 -
Pvu5g1622 1223 Gene3D - 719 919 IPR023214 -
Pvu5g1622 1223 Gene3D - 432 447 IPR023299 GO:0000166
Pvu5g1622 1223 SUPERFAMILY Calcium ATPase, transmembrane domain M 53 1155 IPR023298 -
Pvu5g1622 1223 Gene3D - 590 697 IPR023299 GO:0000166
Pvu5g1622 1223 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 846 960 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu5g1622 1223 SFLD p-type atpase 405 930 IPR044492 -
Pvu5g1622 1223 ProSitePatterns E1-E2 ATPases phosphorylation site. 424 430 IPR018303 -
Pvu5g1622 1223 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1215 - -
Pvu5g1622 1223 SUPERFAMILY HAD-like 410 923 IPR036412 -
Pvu5g1622 1223 Pfam Cation transport ATPase (P-type) 546 650 - -
Pvu5g1622 1223 CDD P-type_ATPase_APLT_Dnf-like 60 1039 - -
Pvu5g1622 1223 SFLD Haloacid Dehalogenase 405 930 - -
Pvu5g1622 1223 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1622 Pvu-Chr5 38307151 38314202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1622 1 1222 Primary Pumps ATPases AT1G17500 74.451 0.0 1921
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1622 K01530 - gmx:100778710 2257.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1622 5 38307151 38314202 Pvu10g1419 10 40896849 40904059 PCT