Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1621 ATGGAACCTCGGATTGGAAACAAGTACCGTCTTGGCCGCAAGATTGGTAGCGGATCCTTCGCCGAGATTTATCTTGGTGTGAATATCGAGACAGATGAAGAGGTTGCAATTAAGCTCGTGTTGTTAAGTTTTAGCGAATGTGCTTCATGGGAGCGTGTCATAAACAATGTAGTGTTGGACGATGTTTTAATTGATTTAATTTTTATAGAGGAATTAATAGTGCAAAAGGTGTGCCCTGGGATCCCTAACGTGAGATGGTTTGGTGTTGAAGGAGACTACAATGTCCTTGTGATGGATTTACTGGGCCCTAGTCTTGCGGATTTATTCTATTTCTGTACCCGGAAATTGTCCCTCAAAACTGTTCTCATGCTTGCTGATCAGAGGGACATCAAGCCAAACAACTTCCTAATGGGTTTAGGGAGGCATGCAAATCAGGTTTATGCCATTGACTTTGGTCTTGCTAAGAAATACAGAGACTTCACCCATCGACATATTCCTTACAGAGTTGTTGCTTTTTATTCAGCAGCACAGAGGTGTGTGGTGGGGGAAGTAGGTGGTGCCTCTGGTTTGTTACTTTATGCAGCTGTGAAGTATTCTAATTGCGGCAAATATGAAGCTAGTTTATTTTCACTAGACCTCTGA 642 0.4252 MEPRIGNKYRLGRKIGSGSFAEIYLGVNIETDEEVAIKLVLLSFSECASWERVINNVVLDDVLIDLIFIEELIVQKVCPGIPNVRWFGVEGDYNVLVMDLLGPSLADLFYFCTRKLSLKTVLMLADQRDIKPNNFLMGLGRHANQVYAIDFGLAKKYRDFTHRHIPYRVVAFYSAAQRCVVGEVGGASGLLLYAAVKYSNCGKYEASLFSLDL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1621 213 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pvu5g1621 213 ProSiteProfiles Protein kinase domain profile. 9 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1621 213 PANTHER CASEIN KINASE-RELATED 76 168 - -
Pvu5g1621 213 PANTHER CASEIN KINASE-RELATED 1 39 - -
Pvu5g1621 213 SMART serkin_6 9 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1621 213 Gene3D Transferase(Phosphotransferase) domain 1 1 188 - -
Pvu5g1621 213 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 1 39 IPR030509 GO:0004672|GO:0005524
Pvu5g1621 213 PANTHER CASEIN KINASE 1-LIKE PROTEIN 2 76 168 IPR030509 GO:0004672|GO:0005524
Pvu5g1621 213 SUPERFAMILY Protein kinase-like (PK-like) 5 168 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1621 Pvu-Chr5 38303900 38305563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1621 5 154 EF-hand Containing Proteins AT2G41860 29.762 2.68e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1621 K08960 K02218 oeu:111406855 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1621 5 38303900 38305563 Pvu10g1418 10 40890559 40894989 PCT