Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1586 ATGGATAAGGACAAATCTCTAGGTCACGGTGGAGGTTTGCCACCTCCCTCGGGGCGTTATTCGGGTTTCTCGCCCACCGGAACTGTGTTTAGTGTGAAATCTGAGCCACCGTCGTCGTCGTCGACGTCGTATCCGCCACTGGCCCCGGGAATTTCCGCGCCGGAGTCTAGTGGGTTTAGTCATGATATTAGCAGAATGCCCGATAATCCGCCGAGAAATAGAGGTCATAGGCGTGCTCATTCCGAGATTCTTACCCTACCGGATGATATTAGCTTTGACAGTGACCTTGGTGTGGTGGGAGGTGTCGATGGGCCTTCCTTCTCCGATGACGCCGAGGAGGACTTGCTGTCCATGTACCTTGATATGGATAAGTTCAATTCGTCGTCGGCGACGTCAACGTTTCAAATGGGCGAACCGTCTAGCGCAATGGGAGCGTCGGGTTCAGCATCAGGGGCACCCACCTCTTCTGCCGAGAATATTGCTGTTGGTACTCATGAACGGCCCAGAGTTAGACACCAGCATAGTCAATCCATGGATGGATCAACTACCATAAAGCCTGAGATGCTGGTTTCTGGTTCCGAAGACTTGTCTGCGGCAGATTCCAAAAAGGCAATGTCAGTTGCTAAGCTTGCTGAGCTTGCCTTGATTGACCCCAAACGTGCGAAAAGGATATGGGCAAATAGACAGTCTGCTGCGCGGTCAAAAGAGAGGAAGATGCGGTACATTGCTGAGCTTGAAAGGAAGGTACAAACATTGCAAACGGAAGCAACATCTTTGTCTGCACAATTAAGTCTCTTGCAGAGGGATACAAATGGCTTGAATTCTGAGAACAGTGAACTGAAGCTGCGGTTACAAACCATGGAGCAACAAGTTCACTTGCAAGATGCACTAAATGACGCATTAAAAGAGGAAATTCAGCATTTGAAAATACTGACTGGACAAGCTATGCCACCTAATGGAGGAGGACCTATGCTGAACTTTCCCTCTTATGGAGGGGGGCAGCAATTCTATCCTAATAATCATGCCATGCACACCCTTTTAGCTGCACAGCAGTTTCAACAACTCCAAATTCATCCTCAGAAGCAGCATCAGTTTCAGCAGCTTCAGCAACAACAAATGCTGCAACAACAGCAGCAACAGCAACAACATCAGCAACAGCAACAACAGCAGCAACAACAGCAACAGCAACAACAGCAGCAGCAACAACAATCAACCGACTTGAAAACGAGAGAAGCTTCACCTACTCTATGTCCCAAAGACAATGCGTTGTCAGATGTAAATCCTTCAGGAGTTAAGGACTGTTGA 1305 0.4843 MDKDKSLGHGGGLPPPSGRYSGFSPTGTVFSVKSEPPSSSSTSYPPLAPGISAPESSGFSHDISRMPDNPPRNRGHRRAHSEILTLPDDISFDSDLGVVGGVDGPSFSDDAEEDLLSMYLDMDKFNSSSATSTFQMGEPSSAMGASGSASGAPTSSAENIAVGTHERPRVRHQHSQSMDGSTTIKPEMLVSGSEDLSAADSKKAMSVAKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLSLLQRDTNGLNSENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKILTGQAMPPNGGGPMLNFPSYGGGQQFYPNNHAMHTLLAAQQFQQLQIHPQKQHQFQQLQQQQMLQQQQQQQQHQQQQQQQQQQQQQQQQQQQQSTDLKTREASPTLCPKDNALSDVNPSGVKDC* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1586 434 MobiDBLite consensus disorder prediction 383 434 - -
Pvu5g1586 434 SMART brlzneu 215 279 IPR004827 GO:0003700|GO:0006355
Pvu5g1586 434 MobiDBLite consensus disorder prediction 129 156 - -
Pvu5g1586 434 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 217 280 IPR004827 GO:0003700|GO:0006355
Pvu5g1586 434 CDD bZIP_plant_RF2 220 269 IPR044759 GO:0003700|GO:0006355
Pvu5g1586 434 Coils Coil 373 403 - -
Pvu5g1586 434 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 422 - -
Pvu5g1586 434 Gene3D - 218 271 - -
Pvu5g1586 434 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 422 - -
Pvu5g1586 434 Coils Coil 235 304 - -
Pvu5g1586 434 MobiDBLite consensus disorder prediction 21 47 - -
Pvu5g1586 434 Pfam bZIP transcription factor 219 277 IPR004827 GO:0003700|GO:0006355
Pvu5g1586 434 MobiDBLite consensus disorder prediction 1 86 - -
Pvu5g1586 434 SUPERFAMILY Leucine zipper domain 219 270 IPR046347 GO:0003700|GO:0006355
Pvu5g1586 434 MobiDBLite consensus disorder prediction 67 84 - -
Pvu5g1586 434 MobiDBLite consensus disorder prediction 383 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1586 Pvu-Chr5 38046607 38050487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1586 19 349 bZIP Transcription Factor Family AT1G06070 73.193 4.35e-170 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu5g1586 bZIP_1 2.6e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1586 - - gmx:100786738 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1586 5 38046607 38050487 Pvu5g1586 5 38046607 38050487 ECH
Pvu5g1586 5 38046607 38050487 Pvu11g0549 11 4546245 4551062 PCT