Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1579 ATGAATCTGCTCTCTCTGCACGGAACACAAAAACATAAAAGTAAATTTTCACAATCACGGTCGCTTCCTACGACAATCGAATTTGCGTCAGCCTCAATTCTCATGGAGTTTGGGATTGATGGCTCCATTAATGGTGAGACAGTAGGAAATGTTACTGTAGGGCAGATTAACTGTTGCAGCACAGCTGATGAAAACAAAGTAGGTTGCAGCTCTTTCAATCCTGCTTATAAACATGATCATGATGATAATATAACTCAAGATTCTTCTGGAGGGGACACAATCCCATCAGGAATTCCTGCAGTATCGGTTGTGTCAGCTGATGAGCCCTATGTGGGACAGGAGTTTGATTCTGAAGCTGCAGCACATGCATTCTATAATGCATATGCTACCCGTGTTGGATTCATCATACGTGTGAGTAAGCTCTCACGATCAAGGCGTGATGGATCTGCTATTGGACGGGCTCTTGTTTGCAACAGAGAGGGCTACAGAATGCCTGACAAACGTGAAAAGATTGTAAGGCAAAGGGCAGAGACCAGGGTTGGCTGCAGGGCAATGATTTTGGTGAGGAAAGTAAGTTCCGGTAAATGGGTTGTTACTAAGTTTATACAGGAGCACGCACATCCTTTGACACCTGGAAAAGGTAGAAGGGATTGCATTTACGAGCAATACCCGAATGAACATGATAAAATTCGAGAACTATCTCAGCAGTTGGCTATTGAGAAAAAACGGTCTGCAACCTATAAAAGGCATCTTGAATTGATATTTGAGCACATTGAAGAGCATAATGAAAGCCTTTCAAAGAAAATACAACACATAGTGGAGAGAGTGAAGGAGATGGAAACCAAAGAACAACAGAGTCAGAGATAG 867 0.4256 MNLLSLHGTQKHKSKFSQSRSLPTTIEFASASILMEFGIDGSINGETVGNVTVGQINCCSTADENKVGCSSFNPAYKHDHDDNITQDSSGGDTIPSGIPAVSVVSADEPYVGQEFDSEAAAHAFYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNREGYRMPDKREKIVRQRAETRVGCRAMILVRKVSSGKWVVTKFIQEHAHPLTPGKGRRDCIYEQYPNEHDKIRELSQQLAIEKKRSATYKRHLELIFEHIEEHNESLSKKIQHIVERVKEMETKEQQSQR* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1579 288 Coils Coil 262 282 - -
Pvu5g1579 288 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 35 286 - -
Pvu5g1579 288 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 35 286 - -
Pvu5g1579 288 Pfam FAR1 DNA-binding domain 124 210 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1579 Pvu-Chr5 38005667 38008643 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu5g1579 FAR1 8.1e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1579 - - gmx:100806900 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1579 5 38005667 38008643 Pvu5g1579 5 38005667 38008643 ECH
Pvu5g1579 5 38005667 38008643 Pvu11g0554 11 4578635 4581159 PCT