Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1578 ATGAACCTATGGCCATTCCGATTTGCGACTCTGCTTGAGGTTGTGGTTTTCTCATGCTTGTGGTTGCAAGTTTCAAGCCTTGGCTCCATGTCTTCCATTGCCGTCTCTTATGGCGACAAAGGGTCTGCGTTTTGTGGCTTGAAATCGGATGGATCTCACACTGTAAACTGTTATGGGATGAACTCTGCCATAATTTATGGAACACCAATTCATTTTCCATTCTTTGGTCTAACAGCCGGTGATGGCTTTGTGTGTGGGGTTTTGATGAGTTCTAGTCAACCGTATTGCTGGGGTAGCAGTAGCCATGTTGAAATGGGTGTGCCACAACCTATGGTGAAGGGAGCTCAGTACCTAGAGATCAGTGCTGGGGATTACCACGTTTGTGGATTGAGGAAACCATTGACTGGAAGACAGAGGAACACTTCTTTGGTTGATTGTTGGGGCTACAACATGACAAATAACTATGTGTTTGAAGGGCAGGTTCAATCCATCTCAGCAGGCTCTCAATTCAACTGTGGCTTGTTTTCTCAGAACAGAAGTGTGTTCTGCTGGGGGGACGAGCCAAGTAGCCAAGTTATTAACATGGTCCCTAGAGGCATGAGGTTCCAGAAGATCTCTGCTGGAGGGTACCATGTGTGTGGAATCTTAGAAGGGGTGGATTCTAGAGCTGTTTGTTGGGGGAGGAGCTTGGTGGATTTGGGGGAAGAGCTTTCAATTTCGTTGACACGTTCAGGACAAGGACAAGGTAACGTTGAATTGGCTCCCAGTGATGCAATGCTTTCTGTGGTGGGAGGGAAGTTCCATGCATGTGGCATTAAGAGCTATGATCGTGGAGTGGTTTGTTGGGGCTATAGTTTCAAAGCAGGCACCCGAGTTCCTAGTGGGATTAGGGCCTTTGAGATTGGTGCTGGGAATTATTTTACCTGTGGAGTAGTTGTTGAGAAATCCCATATGCCTGTTTGTTGGGGTGTTGGCTTCCCCACTTCTCTCCCTTTGCCTGTCTCACCAAGAATGTGTAGGTCTACTCCATGTCCTCCAGATTTCTTTGAAACCTCACAAAATGGTCTTTGCAAGTCACCAGATTCCCATGTTTGCATGCCATGCAGTGCTGCTTGTCCTCCTGAGATGTATATGAGAAGTGGATGCAATTTGAAATCTGACATGCTTTGTGAATATAACTGTTCTCTCTGTTCGTCACCTGAATGCCTCTCCAATTGCTCCTCTTCCTATTCCAATGCTGCCTCTGCCAAGAGAAGTGAAAGATTTTGGTCTCTTCAACTGCCGGTGGTTATTGCTGAGATAGCTTTTGCTGTTTTCTTTGTCTGTATTGTGTCCATAACTGCGGTGTTGTATGTTCGCTACAAGCTAAGAGATTGTGAGTGTTCTTCTTCAGCAAGAGGGTCAAAGGGGAAGAAACTAAAAGGGAGCTCCTCACACCAAAAGGAGAAATCCAAAGTCCGACCAGACTTGGAGGAGTTCAAGATTAGGAGAGCACAGATGTTCCCCTATGAGGAACTTGAACGAGCAACCAGTGGATTCAAAGAAGAGTCCATAGTGGGGAAGGGAAGTTTCTCTTGTGTGTTCAAAGGGGTTCTCAAAGATGGGAGTGTTGTTGCTGTTAAAAGGGCCATAATGTATCCCAACGTGCAGAAGAATTCCAAGGAGTTTCACACTGAGCTTGACCTGCTTTCTAGGCTGAACCATGCACACTTACTCAATCTACTAGGCTACTGTGAAGAGGGTGGAGAGAGACTCCTGGTTTATGAGTACATGGCTCATGGCTCATTGCATCAACACCTTCATGGGAACAAAGTGATGAAAGAGCAAATGGATTGGGTGAGAAGGGTAACAATTGCAGTCCAAGCAGCTAGGGGAATCGAGTATTTGCACGGCTATGCTTGTCCACCAGTGATTCATAGAGACATAAAGTCTTCAAACATCCTCATTGATGAAGAACACAATGCAAGAGTAGCTGATTTTGGTTTGTCACTACTTGGTCCTGCAGATAGTAGCTCCCCACTGGCCGAACTACCAGCTGGGACTCTTGGCTATCTTGATCCTGAATACTATAGGCTTCACTACCTTACCACAAAGTCTGATGTATACAGCTTCGGAGTTCTACTTTTGGAGATATTGAGCGGCAGAAAAGCTATTGACATGCAATATGAAGAAGGTAACATTGTTCAATGGGCAGTGCCTCTGATCAAGTCAGGAGATATAGCTTCAATCTTGGATCCAGTTTTGAAGCCTCCTAATGATATTGATGCATTGAGAAGAATAGCTAATGTGGCTTGTAAAAGTGTGAGAATGAGAGGGAAAGATAGGCCTTCAATGGACAAAGTGACAACAGTTTTGGAGAGAGCTCTTGCACAGTTGATGGGGAGTCCTTGCATTGAGCAGCCAATTTTGCCAACTGAGGTGGTTTTAGGAAGCAACAGACTGCACAAAAAATCATCTCAAAGGTCTTCAAACAGGTCAGCCTCAGAAAGCACTGATGTGGAGGATCAGAGGTTTGAGTTTAGAGCACCCTCATGGATCACTTTCCCCAGTGTGACTTCTTCTCAAAGAAGATCAGGCTCTGAGGCTGATGTTGAAGGAAAAAATATAGAAGTGAGGAATTTGGGCAATGTTGGAGCTGGTGGTGATGCTCTAAAAAGTCTTGAGGAAGAGATTGGTCTTGCCTCTCCTCGAGAGAAACTCTTCTTGCAACACAACTTCTAA 2721 0.4531 MNLWPFRFATLLEVVVFSCLWLQVSSLGSMSSIAVSYGDKGSAFCGLKSDGSHTVNCYGMNSAIIYGTPIHFPFFGLTAGDGFVCGVLMSSSQPYCWGSSSHVEMGVPQPMVKGAQYLEISAGDYHVCGLRKPLTGRQRNTSLVDCWGYNMTNNYVFEGQVQSISAGSQFNCGLFSQNRSVFCWGDEPSSQVINMVPRGMRFQKISAGGYHVCGILEGVDSRAVCWGRSLVDLGEELSISLTRSGQGQGNVELAPSDAMLSVVGGKFHACGIKSYDRGVVCWGYSFKAGTRVPSGIRAFEIGAGNYFTCGVVVEKSHMPVCWGVGFPTSLPLPVSPRMCRSTPCPPDFFETSQNGLCKSPDSHVCMPCSAACPPEMYMRSGCNLKSDMLCEYNCSLCSSPECLSNCSSSYSNAASAKRSERFWSLQLPVVIAEIAFAVFFVCIVSITAVLYVRYKLRDCECSSSARGSKGKKLKGSSSHQKEKSKVRPDLEEFKIRRAQMFPYEELERATSGFKEESIVGKGSFSCVFKGVLKDGSVVAVKRAIMYPNVQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEYMAHGSLHQHLHGNKVMKEQMDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPADSSSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVQWAVPLIKSGDIASILDPVLKPPNDIDALRRIANVACKSVRMRGKDRPSMDKVTTVLERALAQLMGSPCIEQPILPTEVVLGSNRLHKKSSQRSSNRSASESTDVEDQRFEFRAPSWITFPSVTSSQRRSGSEADVEGKNIEVRNLGNVGAGGDALKSLEEEIGLASPREKLFLQHNF* 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1578 906 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Pvu5g1578 906 ProSiteProfiles Protein kinase domain profile. 513 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1578 906 Gene3D Transferase(Phosphotransferase) domain 1 591 795 - -
Pvu5g1578 906 Gene3D - 156 292 IPR009091 -
Pvu5g1578 906 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 1 906 - -
Pvu5g1578 906 Pfam Protein kinase domain 513 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1578 906 PANTHER RECEPTOR-LIKE KINASE 1 906 - -
Pvu5g1578 906 MobiDBLite consensus disorder prediction 814 835 - -
Pvu5g1578 906 Gene3D - 20 155 IPR009091 -
Pvu5g1578 906 SMART serkin_6 513 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu5g1578 906 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 343 390 IPR001368 GO:0005515
Pvu5g1578 906 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 92 133 IPR000408 -
Pvu5g1578 906 Gene3D Phosphorylase Kinase; domain 1 483 590 - -
Pvu5g1578 906 SUPERFAMILY RCC1/BLIP-II 26 229 IPR009091 -
Pvu5g1578 906 SUPERFAMILY Protein kinase-like (PK-like) 493 785 IPR011009 -
Pvu5g1578 906 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Pvu5g1578 906 MobiDBLite consensus disorder prediction 462 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1578 Pvu-Chr5 38001220 38004640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1578 11 906 Receptor kinase-like Gene Family AT3G59420 66.300 0.0 1206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Pvu5g1578 Pkinase 7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1578 - - gmx:100807392 1632.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0557 11 4602210 4605788 Pvu5g1578 5 38001220 38004640 PCT