Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1575 ATGGATCACGAATCCGGCCAGGGATTTGATTCAGATGACAGTGAACTTGATATGCAAGCAGAAATTAGTGAGAAACACGGGAAAATAGATGAATTTTCAAAAAACCTAGAATTATGTGGAAGTGAAGATGAGAAGTTTGTTGAATTACCTGCAACAGAAATTTCAACAGATATAGAAGCTGTTGAACCATTCATTGGCATGGAGTTCAATTCAAGAGAGGAGGCGAGAGAATTCTACATTGCCTATGGTAGGCGAATAGGGTTTACAGTACGAATACACCACAATCGTCGATCACGAGTAAATAACCAGGTTATTGGTCAAGATTTTGTCTGCTCAAAAGAAGGCTTTCGAGCAAAAAAGTATGTACACAGAAAAGATAGAGTGCTGCCTCCACCACCAGCCACTCGTGAAGGTTGTCAGGCCATGATAAGGCTGGCTTTACGGGATGGAGGGAAGTGGGTTGTCACCAAATTTGTAAAAGAGCATAATCATAAGCTAATGAGTCCCAGTAAAGTTCCATGGCGAGGATCTGGGAAGCACTTGGTTAGCGAGGATGAGAAGGATAAGAGAATCCGTGAGCTATCACTTGAGTTGTACAATGAAAGGCAAAAGTGCAAACGACGCTGTGCTGCATATGAAGAGCAATTAAATATGATTTTGAATGATTTAGAGAAGCACACCGAACATATTTCTGAAAAAGTTGCTGCTGTAGTACGAAGTATAAGAGAGATTGAGGAGGAAAAATCAGATTCAGATGGTGGGTAG 765 0.4105 MDHESGQGFDSDDSELDMQAEISEKHGKIDEFSKNLELCGSEDEKFVELPATEISTDIEAVEPFIGMEFNSREEAREFYIAYGRRIGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYVHRKDRVLPPPPATREGCQAMIRLALRDGGKWVVTKFVKEHNHKLMSPSKVPWRGSGKHLVSEDEKDKRIRELSLELYNERQKCKRRCAAYEEQLNMILNDLEKHTEHISEKVAAVVRSIREIEEEKSDSDGG* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1575 254 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 1 253 - -
Pvu5g1575 254 PANTHER FAR-RED IMPAIRED RESPONSE-LIKE PROTEIN 1 253 - -
Pvu5g1575 254 Pfam FAR1 DNA-binding domain 77 167 IPR004330 -
Pvu5g1575 254 MobiDBLite consensus disorder prediction 1 26 - -
Pvu5g1575 254 Coils Coil 202 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1575 Pvu-Chr5 37984517 37988884 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pvu5g1575 FAR1 7e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1575 - - gmx:100813124 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1575 5 37984517 37988884 Pvu5g1575 5 37984517 37988884 ECH