Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1549 ATGGATCCAGAAAAATCAGTAGAGGATCAATTCTCCAAGCTACATCCTTCCATGCCAGTAAACACCAAAATTGGAATAGTGGGTGGTGGTCCAAGTGGCTTATCAGCTGCTTATGCACTGGTCAGGCTTGGATATAATAATGTCACTGTCTTAGAGAAACATCATTCAGTTGGGGGCATGTGTGAGTCAGTAGAAATTGAAGGAAGAGTTTATGATCTGGGTGGCCAAGTTCTGGCTGCAAGCAGTGCTCCAGTCATCTTTCACTTGGCAAAAGAGACAGGTTCTCCACTAGAAGAAATGGACTCCCACAAGCTTGCTGTTATTGACAGTTCCTCAGGACAATACCAAGATATCAAAGTAGCTGATGATTATGTGTCTGTCATGTCACTTACATTAGCAATCCAAGAAAAGGTGAAGCATTCTGGTCGTTTAGGGGTTCATGCTGTCAGTGAAGTTGCTTCAGACTTAGCTCCAGAATATGTTGAGCAACATGGACTTAAATCTGTCCCTAAATCTGTGGCTTATGGTTACACTGCTTCAGGATATGGGTTTATTCAAGATATGCCTTATGCCTACATTCATGAATTTACCAGAACTTCCATGGCTGGAAAAATTCGACGATTTAAAGGTGGATATACGAGTCTTTGGCAGAGGATTGCTGAATCACTTCCTATAAAACTTCACTGTAACACTGAGGTGTTCACAATCAAGAGGAACTCTAACAGTGTCACCGTTAATGTCAAGTGCTCAAGTGAAATTGAAACTATGGAATTTGATAAGATCATAATCTCGGGCAATTTTCCACTAAAATATGGAAGAACTTATAGATCAGTACCTTCAACTAGCTTAGAGTGTGAATCAGAAGTAATGGATGTAAGTGAACTTGAAAAGGATTTGTTCAGCAAAGTTGAAACAAATGACTACTACACAACTGTTTTAAAGATAAAGGGAATGGAACAAATGCCTGTTGGATTTTACTATTTTAGAGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCCATGCAGAAGTTTTATGCAGACAGTGATATATTCCTGTTCTGGTCCTATGGCAACTCTGCTGATATTAAGGGACCAACTGTCACTGAGCTTGCAATCAAATCAGTAAAGTCAATGGGGGGAGAAGTTGAGAATTTCATTCTTCAACGTCGTTTTAAGTATTTTCCTCACGTCAGCAGCCAAGATATGAGAAACGGATTCTATGAAAAGTTGGAGTCAGAGCTTCAAGGTTCAAGGAATACTTATTATGTTGGTGGGCTTATGGCCTTTGAGCTTACAGAGAGAAACTCATCTTATGCCATGGCTTTGATCTGCAAGAAATTTGCAAATAGCAGTGATTTGCCAGTGTTTCCTTACACTAAGAGTTTGTTTCCCTTGCAAAGTGAGTTCCAGAAAAAGGAGCCTAAAGAACTAGGTGAATTGCCCGGAGTGCAATTTCCCAATTTGCCAACTTTGAATAGCTATTTGAAGCATTGGGGAACTCATACAGTGACTCAAAACAGAACTCTTTACACTTGGATAAATGAAGGAGGAACAGTGGGTGGCAAGAGGACATATGGAGAACAACACTTGAATGCTTCATGTATTGCACATAAGCTCTTAACGAGTGAAAAGACAGTGATCAAGCCTGGTGACAGGGTTCTCCTAGTCTATGTTCCTGGTCTAGATTTCATTGATGCCTTCTTTGGATGTCTAAGAGCTAAAGTTTTACCAGTCCCAGTTCTTCCCCCGGACCCCATGCAAAGAGGTGGACAAGCACTTCTAAAAATTGAGAACATTGCCAAGTCATGTGGCATAGTGGCGATTTTATCAACAGTGGCTTATCATTCAGCAGTACGTGCAGGTCAGCTGAAAAGTTTGATCTCATTAACTGGAAAAATTGGGAAATCCGCAGCTCAGTGGCCTAAACTTCCTTGGCTGCACACTGATTCTTGGGTCAATAATAACTCAAGAAATTTGGCTTTGGAAGATGTAGATGATCAATGTGAATCCAAGCCTAGTGATATATGTTTCTTGCAGTTTACCTCAGGTTCAACTGGTGATGCTAAAGGAGTCATGATTACTCATGGAGGGCTCATTCACAATGTGAAGTTGATGAAAAGTGTATACAAGAGCACCTCAAGGACAATGCTAGTGAGTTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGAGGACTTTTTACGGCTCTTGTTAGTGGTGGATCTGCTGTGCTTTTCTCACCGATTACATTTATTAAGAAACCACTCTTATGGCTTGAAACCATGAGCAAGTATCAAGCAACTCACAGTGCTGGCCCCAACTTTGCTTTTGAGTTGGTGGTTCGAAGGTTAGAATCTGAAAAGGACAAGCTTCAGAATTTAAACCTCTCATCCATGGTTTTTCTCATGGTTGCCGCTGAGCCAGTGAGACTGAAGACCATGAAAAGGTTTCTTGATTTAACTGCTTCTTTTGGCTTATCTCAGAAGGTGATGGCTCCAGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGTGAAGGGTGTCCTATTCTTGTTGACTGGCAGGGAAGAGTTTCTTGTGGATATATTCACCCTGGTGATGCAGATATTGACATTAGAATAGTTGATCCAGAGAATTGTGAAGAGCTTCGAGAAGATGGAAAGGAAGGAGAAATATGGATTAGTAGTCCAAGTGCTGGAATAGGATACTGGGGAAAGGAAGAACTGAGTCAGAAAACTTTTAGAAATGAGCTTCAGAACCATCCTGGACGAAACTACACAAGAACTGGAGACTTGGGAAGAATAATTGATGGGAAGCTATTCATCACCGGGAGAATCAAGGATCTTATCATTGTGGCTGGAAGAAACATCTACTCAGCAGATGTTGAGAAAACAGTGGAGACTTCATCTGAATTTCTTCGTCCAGGGTGTTGTGCAGTCATTGGTGTCCCTGAGGAGGTTTTATCAGCAAAGGGGATTACCCTGCCAGATGGATCTGACCAAGTTGGCTTGGTTGTGGTTGCTGAAGTGAGGGATGGTAAAGCGGTGAGCAAAGATGTGATTGAGCATATTCAGACTCGTGTGGCAGAAGAACATGGAGTCAGTGTTGCTTCTGTCAAGTTGATCAAGCCAAGAACCATCAGCAAAACAACCTCAGGAAAAATCAAGAGATTTGAATGTCTCAAACAGTTTGCAGATGAAACACTGAATTTGGTGCCTCAACCTATTCCGACAAGGAAATCACTGTTAAGATCGTTTACTACAGGAACATGCACAGAAGGAAGAACACCCCGGGCCCACCTGGTGAGAAGTAGTAATCCTCTACCTATTCCAAAAAGTAACAAGGAAATTGTGGAACACTTGAAAAGGCTTATTTCTGAGCACTCAGGAATCCCAATCAAAGATATCTCAGTCGCAGAGAACATGTCAGCCTATGGAATTGATTCAATTGGAGTGGTTAAAGCAACTCAAAAACTCTCAGATTTCCTGGGTGTGCCAGTTGCAGCTATAGATGTCTTCACTGCATCATGCATTCAAGAATTGGCTAACTTCTCCGAGAATCTTATGTTAAAGTCTCAAAGCAATTCATCCCATGCTCCACTTGCTGACATTGACACTACTGAAATGGTTGTGGATGTGTCCAAGTCTCGCCAATGGGTTGATATCACAGACCCGTCTCTGGTTTCAATTGGAGATGAAGTTGCCATTGCTGAAGGGGTTTTGGTTCAAAGTCATGAGGTGAAGAATGGAATTCTAAGTCTCCTCCCTATTAGGATAGGTAGAAATTCTTCAATTGGGCCTTATTCTACTATTCAAAAAGGAAGTGTGATTAAAGAAGGATCTGAAGTAGAACCCCTGCAAAAGGTTGAAGGAGGCCAACATGTGCCCAAGCCTGCTAAGCTTAATAACGTTAAAGAGAATGCAGTGTTGCTTGTTACAACCAGCAAAACTCAGTCTAATGCCATGTACCATTTCTTGGGGATCTATCTTACTGGCTTTCTCAGCTCCCTTGCTGCAGCCATTGCTTACATTCTTTACACATGGTTCTTCCGGATACCTGCATCATTCCAACACTTCTCATTTCTTTGCATATGTGGGGCATTCCATTGGATCCCATTTACCATTGTTGCATATGCCACCATGTTTTCTGATATCCCATCAAATCCCATTGTCTTTACCATTTCATTTACCTGCGCCTACTTGCTCCATGGTCTCATACTCACCTCTCTCACCTGCGCCTTGACCCGTTTGCTCAAATTCAGTCAAAACCAAACCCATTTTAAAACCTGGCTTAGAAATCGATTGACCATTTCCTGCCACCAAAGATTTGCCAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCACTGTTCGATCAGAGCCATCAACCCAGTTTCAAACCCCGAGTTAATGTCAATAGGTGATGGAGTCCATCTTGGTGATTTTAGCAAGATAATCACTGGTTTCCACTATTCAAACGGATATGCTTGTGGAAAAATAGAGGTTCAGGATAATTCAGTTGTGGGGAGTCAAAGCCTAGTCCTCCCAGGTTCTGTTGTAGAAAAGAATGTCATTCTGGGTGCTCTTTCAGTTGCTCCAATGAACTCTATACTCCATGAGGGTAGCGTGTATATTGGATCCCAAACCCGAGTTGCAACCAGGAACTCTTCAAACTCTTTAGATGAACGGATAGAGGAGATGGACATGGAATACAAGAAAGTAGTCGCAAATATGGCTGCAAATTTAGCTGTAACAACTATCAATGTCAAAGCAAGATACTTCCACCGCATTGGTGTTAGTGGAAAGGGGCACTTGAAAATCTATGACAAACTTGAGGGCATTCCACTGCACAAGGTTTTTCAGCCTGGTAAAAGCTACCCCGTCATGGTAAGACACAGTAATAGCTTGAGTGCTGATGATGATGCTAGGATCGATGCACGTGGTGCATCTTTGAGGATTCTTTCTGATGCACCCGATTCTAACCATGTTCCCCTCATTGACCTGACACTGAAAACTGGCAATGCGTTTTATGCTCGCACTCTTGCTGATTTTGCAAGCTGGCTTGTGTGTGGCCTCGCTGCGAGAGAGGAACTTGTCAAGCGTACCCCACATGTTCGTGAAGCAGTGTGGAATTCACTTCGACATGCTCACTCATATGCTGAACTGCATTACTACTCAAACTATTGCAGGCTCATGCGCTGCACCGATGGACAAGAAATGTACGTGAAGTTCAAGCTAAGGCCTATTGACAGAAGCATTGGTGAGGACGCAGGTAAGGTTAAACCAACTGGGATTCTTCCACCGGAAACAGGGGCAATTCCAAGGGATGAAAACGATACACGTCCCTTACTTTTCCTTGCTCAAGACTTTCAACGGCGCGTGAGTTCCCCTGGTGGAGTTCGCTATGTCTTCCAAGTGCAACTTCGAGCAGTGCCAGAAGATGAAGCCGCGCGTGACATTGCACTGGACTGCTCCAAACCATGGAATGAAACTGAGTTCCCATGCATTGATGTTGGAGAGATAAACATCACTGAGAATCTCTCTAGGGAAGAATCAGACAAGCTTGAATTCAACCCCTATATCAAAAGCCATGAGTTGGATGTGATCCCCGCCACTTCCAACACCCAGAGTGCCTCAATCGATCATGGCCGTTCATTGATCTACGAGATTTGCCAGCACGTGCGTAATGGACAGCGGCTCCCACACTCTTGGAGAAACCTCGTAGAGCAATCCAACGTTAAGGTAGACTTGTCCTGCTGTCCTATCGCAGCATCAGTAGCAACACCAAAGCCCAAAAAGGAGACGAAATTGGTGACAACCTTAACCTTGACAAGAACCTGGTACCAGACATTCTCCGCGGTTTTCACTCAACCGTTGCTACAAACAGTTTTGCCTTACACGGTGGTGGGTTTGTCTGTTTTTGCCCCTCTGAACTTTGTAGTGAATATGAAGAACGCTGAGAAACTCTCAGTGCAATGGCTGTTTCCTTTGTTTTGGATTCTCTCGGGTGTTATGGGTGCACTGGCATGTGTTGTGGCGAAATGGGTTCTGGTGGGGAGGAAGAGAGAGGGTGAGATGGTGCCCTTGTGGAGCAAAAGGGTGATGATGGATAGCACGTGGCAAGCCATTAGAGCAGTGGTTGGGGAGTACTTCATGGAGATAGCAAGTGGGTCGTTTTTGTTCGTGATGTGGATGAGGTTGATGGGTTCAGAGGTAGACATGGATGGTGATGCTTACGTTGACAGCATGGGAGCTTTGTTGAACCCTGAAATGGTGAAGATTGAGAGAGGTGGTTGTGTGGGAAGAGAAGCATTGGTATTTGGACACATATATGAAGGTGATGAAGGTGGAATGGTGAAGTTTGGTGGAATCAAAATTGGTGAAGAAGGGTTTGTGGGAAGTAGAGCTGTGATCATGCCTGGTGTTCATGTGGAGAATGAAGCCAATCTTTCTGCACTTTCTCTTGCCATGAAAGGAGAAATAGTTAGGTCAAGATAA 6552 0.4333 MDPEKSVEDQFSKLHPSMPVNTKIGIVGGGPSGLSAAYALVRLGYNNVTVLEKHHSVGGMCESVEIEGRVYDLGGQVLAASSAPVIFHLAKETGSPLEEMDSHKLAVIDSSSGQYQDIKVADDYVSVMSLTLAIQEKVKHSGRLGVHAVSEVASDLAPEYVEQHGLKSVPKSVAYGYTASGYGFIQDMPYAYIHEFTRTSMAGKIRRFKGGYTSLWQRIAESLPIKLHCNTEVFTIKRNSNSVTVNVKCSSEIETMEFDKIIISGNFPLKYGRTYRSVPSTSLECESEVMDVSELEKDLFSKVETNDYYTTVLKIKGMEQMPVGFYYFREYMEDPSTIGNPVAMQKFYADSDIFLFWSYGNSADIKGPTVTELAIKSVKSMGGEVENFILQRRFKYFPHVSSQDMRNGFYEKLESELQGSRNTYYVGGLMAFELTERNSSYAMALICKKFANSSDLPVFPYTKSLFPLQSEFQKKEPKELGELPGVQFPNLPTLNSYLKHWGTHTVTQNRTLYTWINEGGTVGGKRTYGEQHLNASCIAHKLLTSEKTVIKPGDRVLLVYVPGLDFIDAFFGCLRAKVLPVPVLPPDPMQRGGQALLKIENIAKSCGIVAILSTVAYHSAVRAGQLKSLISLTGKIGKSAAQWPKLPWLHTDSWVNNNSRNLALEDVDDQCESKPSDICFLQFTSGSTGDAKGVMITHGGLIHNVKLMKSVYKSTSRTMLVSWLPQYHDMGLIGGLFTALVSGGSAVLFSPITFIKKPLLWLETMSKYQATHSAGPNFAFELVVRRLESEKDKLQNLNLSSMVFLMVAAEPVRLKTMKRFLDLTASFGLSQKVMAPGYGLAENCVFVSCAFGEGCPILVDWQGRVSCGYIHPGDADIDIRIVDPENCEELREDGKEGEIWISSPSAGIGYWGKEELSQKTFRNELQNHPGRNYTRTGDLGRIIDGKLFITGRIKDLIIVAGRNIYSADVEKTVETSSEFLRPGCCAVIGVPEEVLSAKGITLPDGSDQVGLVVVAEVRDGKAVSKDVIEHIQTRVAEEHGVSVASVKLIKPRTISKTTSGKIKRFECLKQFADETLNLVPQPIPTRKSLLRSFTTGTCTEGRTPRAHLVRSSNPLPIPKSNKEIVEHLKRLISEHSGIPIKDISVAENMSAYGIDSIGVVKATQKLSDFLGVPVAAIDVFTASCIQELANFSENLMLKSQSNSSHAPLADIDTTEMVVDVSKSRQWVDITDPSLVSIGDEVAIAEGVLVQSHEVKNGILSLLPIRIGRNSSIGPYSTIQKGSVIKEGSEVEPLQKVEGGQHVPKPAKLNNVKENAVLLVTTSKTQSNAMYHFLGIYLTGFLSSLAAAIAYILYTWFFRIPASFQHFSFLCICGAFHWIPFTIVAYATMFSDIPSNPIVFTISFTCAYLLHGLILTSLTCALTRLLKFSQNQTHFKTWLRNRLTISCHQRFAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPELMSIGDGVHLGDFSKIITGFHYSNGYACGKIEVQDNSVVGSQSLVLPGSVVEKNVILGALSVAPMNSILHEGSVYIGSQTRVATRNSSNSLDERIEEMDMEYKKVVANMAANLAVTTINVKARYFHRIGVSGKGHLKIYDKLEGIPLHKVFQPGKSYPVMVRHSNSLSADDDARIDARGASLRILSDAPDSNHVPLIDLTLKTGNAFYARTLADFASWLVCGLAAREELVKRTPHVREAVWNSLRHAHSYAELHYYSNYCRLMRCTDGQEMYVKFKLRPIDRSIGEDAGKVKPTGILPPETGAIPRDENDTRPLLFLAQDFQRRVSSPGGVRYVFQVQLRAVPEDEAARDIALDCSKPWNETEFPCIDVGEINITENLSREESDKLEFNPYIKSHELDVIPATSNTQSASIDHGRSLIYEICQHVRNGQRLPHSWRNLVEQSNVKVDLSCCPIAASVATPKPKKETKLVTTLTLTRTWYQTFSAVFTQPLLQTVLPYTVVGLSVFAPLNFVVNMKNAEKLSVQWLFPLFWILSGVMGALACVVAKWVLVGRKREGEMVPLWSKRVMMDSTWQAIRAVVGEYFMEIASGSFLFVMWMRLMGSEVDMDGDAYVDSMGALLNPEMVKIERGGCVGREALVFGHIYEGDEGGMVKFGGIKIGEEGFVGSRAVIMPGVHVENEANLSALSLAMKGEIVRSR* 2184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1549 2183 SUPERFAMILY Trimeric LpxA-like enzymes 1231 1305 IPR011004 -
Pvu5g1549 2183 Gene3D - 303 396 - -
Pvu5g1549 2183 ProSiteProfiles Carrier protein (CP) domain profile. 1122 1196 IPR009081 -
Pvu5g1549 2183 ProSiteProfiles catalase family profile. 1541 2183 IPR018028 GO:0004096|GO:0006979|GO:0020037
Pvu5g1549 2183 CDD FAAL 505 1073 IPR040097 GO:0008610
Pvu5g1549 2183 Gene3D - 94 202 - -
Pvu5g1549 2183 SUPERFAMILY Heme-dependent catalase-like 1602 1916 IPR020835 GO:0020037
Pvu5g1549 2183 Gene3D Catalase core domain 1568 1923 - -
Pvu5g1549 2183 SUPERFAMILY Trimeric LpxA-like enzymes 2057 2176 IPR011004 -
Pvu5g1549 2183 ProSitePatterns Phosphopantetheine attachment site. 1151 1166 IPR006162 -
Pvu5g1549 2183 PANTHER AMP-BINDING ENZYME 1 1226 - -
Pvu5g1549 2183 PANTHER AMP-BINDING ENZYME 1227 2183 - -
Pvu5g1549 2183 SUPERFAMILY Acetyl-CoA synthetase-like 494 1078 - -
Pvu5g1549 2183 PANTHER AMINE OXIDASE 1 1226 - -
Pvu5g1549 2183 PANTHER AMINE OXIDASE 1227 2183 - -
Pvu5g1549 2183 Gene3D - 482 953 IPR042099 -
Pvu5g1549 2183 SUPERFAMILY FAD/NAD(P)-binding domain 18 271 IPR036188 -
Pvu5g1549 2183 Pfam AMP-binding enzyme 521 959 IPR000873 -
Pvu5g1549 2183 Pfam Phosphopantetheine attachment site 1128 1191 IPR009081 -
Pvu5g1549 2183 Gene3D Hexapeptide repeat proteins 1435 1567 - -
Pvu5g1549 2183 Pfam Flavin containing amine oxidoreductase 32 265 IPR002937 GO:0016491
Pvu5g1549 2183 Gene3D Hexapeptide repeat proteins 1194 1328 - -
Pvu5g1549 2183 Gene3D - 954 1084 IPR045851 -
Pvu5g1549 2183 PRINTS Adrenodoxin reductase family signature 23 45 - -
Pvu5g1549 2183 PRINTS Adrenodoxin reductase family signature 47 60 - -
Pvu5g1549 2183 ProSitePatterns Putative AMP-binding domain signature. 681 692 IPR020845 -
Pvu5g1549 2183 SUPERFAMILY Trimeric LpxA-like enzymes 1458 1583 IPR011004 -
Pvu5g1549 2183 SUPERFAMILY ACP-like 1121 1197 IPR036736 -
Pvu5g1549 2183 Gene3D - 23 446 IPR036188 -
Pvu5g1549 2183 Gene3D - 1115 1193 IPR036736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1549 Pvu-Chr5 37752211 37759876 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1549 657 1070 Monolignol Biosynthesis Gene Families AT4G05160 24.122 2.52e-18 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1549 - - pvu:PHAVU_011G056700g 2422.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1549 5 37752211 37759876 Pvu5g1549 5 37752211 37759876 ECH
Pvu5g1549 5 37752211 37759876 Pvu11g0582 11 4867422 4873232 PCT