Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu5g1539 ATGGCACTCAGCTCCGGCGTGCGGTCGTGTCCTCCGTCGGACAGGGCCGCGCTGCTGGCATTCAAGGCGGCGCTACGCGAACCCTACCTGGGAATCTTCAACTCGTGGACCGGCGCCGACTGCTGCCACAACTGGTACGGCGTGAGCTGCGACCAGGAGACCCGCCGCGTCGCCGACATCAGCCTCCGCGGCGAGTCGGAGGAGCCGATCTTCGAGCGGGCGCACCGGACTGGCTACATGACCGGCTACATCTCGCCGGCGATCTGCAAGCTCGCGCGGCTTTCCAGCATCACCATCGCGGACTGGAAGGGAATCTCCGGGGAGATCCCTCGCTGCATCGCGGCCCTGCCGTTCCTCCGCATCGTCGACCTCATCGGAAACCGCATCTCCGGCAGCATCCCCGCGGACATCGGCAGGCTCCACCGCCTCACGGTGCTGAACATCGCCGACAACCGCATCTCCGGCACGATCCCGGCGTCGCTCGCGAACCTCACGAGTCTCATGCACTTGGATCTCCGTAACAACCTCCTCTCCGGGCCCATTCCGAGACACTTCGGTTCTCTCCGAATGCTGAGCCGGGCCTTGCTCAGTGGAAACCGCCTCAGCGGGCCCATCCCGGGCTCCGTTTCACTCATTTACCGTCTGGCGGATCTGGATCTGTCCCGGAACCAACTTTCCGGGCCCATTCCGGAGTCACTGGGTAAAATGGCGGTGCTCTCTACGCTGAATTTGGACCTGAACAAACTCTCCGGGCCCATTCCCGTGAGCCTGTTCAGTTCGGGTATCAGTGACCTAAACTTGAGCCGAAACGCGTTGGAGGGTAACATACCCGACGCTTTTGGTCCAAGGTCTTACTTCACTGCCCTTGATCTGTCCTACAATAATCTGAAAGGAACCATACCCAAATCACTATCCTCTGCTTCCTACATTGGACACTTAGATTTGAGTCACAACCATCTCTGTGGCAAGATTCCCCTTGGATCTCCCTTCGATCATCTAGAAGCTTCTTCCTTCGTCTTCAACGATTGTCTCTGCGGAAAGCCTCTCAAACCTTGCTAA 1059 0.594 MALSSGVRSCPPSDRAALLAFKAALREPYLGIFNSWTGADCCHNWYGVSCDQETRRVADISLRGESEEPIFERAHRTGYMTGYISPAICKLARLSSITIADWKGISGEIPRCIAALPFLRIVDLIGNRISGSIPADIGRLHRLTVLNIADNRISGTIPASLANLTSLMHLDLRNNLLSGPIPRHFGSLRMLSRALLSGNRLSGPIPGSVSLIYRLADLDLSRNQLSGPIPESLGKMAVLSTLNLDLNKLSGPIPVSLFSSGISDLNLSRNALEGNIPDAFGPRSYFTALDLSYNNLKGTIPKSLSSASYIGHLDLSHNHLCGKIPLGSPFDHLEASSFVFNDCLCGKPLKPC* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu5g1539 352 Gene3D Ribonuclease Inhibitor 262 352 IPR032675 -
Pvu5g1539 352 Gene3D Ribonuclease Inhibitor 182 260 IPR032675 -
Pvu5g1539 352 SUPERFAMILY L domain-like 9 351 - -
Pvu5g1539 352 Gene3D Ribonuclease Inhibitor 12 181 IPR032675 -
Pvu5g1539 352 Pfam Leucine rich repeat 263 320 IPR001611 GO:0005515
Pvu5g1539 352 Pfam Leucine rich repeat 142 201 IPR001611 GO:0005515
Pvu5g1539 352 Pfam Leucine rich repeat N-terminal domain 12 51 IPR013210 -
Pvu5g1539 352 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 3 352 - -
Pvu5g1539 352 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 3 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu5g1539 Pvu-Chr5 37670435 37672198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu5g1539 75 352 Receptor kinase-like Gene Family AT5G46330 39.437 2.54e-49 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu5g1539 - - gmx:100804739 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1539 5 37670435 37672198 Pvu11g2206 11 49695779 49697294 ECH
Pvu5g1539 5 37670435 37672198 Pvu5g1539 5 37670435 37672198 ECH
Pvu5g1539 5 37670435 37672198 Pvu11g0592 11 4952515 4954711 PCT